RNA id: TU107066


Basic Information

Item Value
RNA id TU107066
length 364
lncRNA type sense_over
GC content 0.48
exon number 2
gene id G79918
representative False

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39713213 ~ 39778094 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgtttgtctgtgtgtgtgtgtgtttgtctgtgtgtgtgtgtgtgtgtgtgtgtttgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtctgtgtgtgtgtgtgtgtgtgtgtttgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtctgtgtgtgtgtgtgtgtttgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU107059 lncRNA upstream 37896 39674723 ~ 39675317 (+) True G79913
TU107056 lncRNA upstream 56411 39656400 ~ 39656802 (+) True G79911
XR_005639756.1 lncRNA upstream 124731 39574338 ~ 39588482 (+) True LOC120562366
TU107047 lncRNA upstream 137541 39559108 ~ 39575672 (+) False G79903
TU107067 lncRNA downstream 12476 39790570 ~ 39794567 (+) True G79919
TU107075 lncRNA downstream 13593 39791687 ~ 39848872 (+) False G79922
TU107081 lncRNA downstream 25346 39803440 ~ 39918554 (+) False G79922
TU107079 lncRNA downstream 70438 39848532 ~ 39943001 (+) False G79922
TU107072 lncRNA downstream 82980 39861074 ~ 39861548 (+) False G79922
XM_039807012.1 mRNA upstream 286093 39425328 ~ 39427120 (+) True LOC120563008
XM_039807014.1 mRNA upstream 286093 39425328 ~ 39427120 (+) False LOC120563008
XM_039807013.1 mRNA upstream 286093 39425328 ~ 39427120 (+) False LOC120563008
XM_039807020.1 mRNA upstream 293540 39391948 ~ 39419673 (+) True LOC120563011
XM_039807030.1 mRNA upstream 381697 39321630 ~ 39331516 (+) True LOC120563019
XM_039806203.1 mRNA downstream 3142 39781236 ~ 39803887 (+) True LOC120562494
XM_039806074.1 mRNA downstream 33761 39811855 ~ 39828704 (+) True LOC120562359
XM_039806205.1 mRNA downstream 146231 39924325 ~ 39979365 (+) True LOC120562496
XM_039806075.1 mRNA downstream 304936 40083030 ~ 40093260 (+) True LOC120562361
XM_039806076.1 mRNA downstream 304936 40083030 ~ 40093260 (+) False LOC120562361
TU106769 other upstream 249372 39460448 ~ 39463841 (+) True G79722
TU106757 other upstream 258921 39433461 ~ 39454292 (+) True G79713
TU106759 other upstream 258921 39433461 ~ 39454292 (+) False G79713
TU106586 other upstream 391888 39313989 ~ 39321325 (+) False LOC120563015
TU106594 other upstream 409143 39302039 ~ 39304070 (+) True dcst2
TU107204 other downstream 538645 40316739 ~ 40321067 (+) True G80003
TU107169 other downstream 556268 40334362 ~ 40345060 (+) False LOC120562498
TU107236 other downstream 638984 40417078 ~ 40420429 (+) False LOC120562499
TU107237 other downstream 641775 40419869 ~ 40420429 (+) False LOC120562499
TU107235 other downstream 641885 40419979 ~ 40420429 (+) False LOC120562499

Expression Profile