RNA id: TU107067


Basic Information

Item Value
RNA id TU107067
length 368
lncRNA type intronic
GC content 0.48
exon number 2
gene id G79919
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39714107 ~ 39870796 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatttgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtctgtgtgtgtgtttgtgcagtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgcagtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttatatgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU107071 lncRNA upstream 7445 39717065 ~ 39783125 (+) True G79921
TU107086 lncRNA upstream 10705 39761259 ~ 39779865 (+) True G79923
TU107065 lncRNA upstream 12476 39713213 ~ 39778094 (+) True G79918
TU107066 lncRNA upstream 12476 39713213 ~ 39778094 (+) False G79918
TU107044 lncRNA upstream 23447 39766269 ~ 39767123 (+) False LOC120562364
TU107081 lncRNA downstream 8873 39803440 ~ 39918554 (+) False G79922
TU107079 lncRNA downstream 53965 39848532 ~ 39943001 (+) False G79922
TU107072 lncRNA downstream 66507 39861074 ~ 39861548 (+) False G79922
TU107076 lncRNA downstream 66507 39861074 ~ 39918554 (+) True G79922
TU107102 lncRNA downstream 71210 39865777 ~ 39867761 (+) False LOC120562365
XM_039806080.1 mRNA upstream 19150 39765173 ~ 39771420 (+) True LOC120562364
XM_039807012.1 mRNA upstream 363450 39425328 ~ 39427120 (+) True LOC120563008
XM_039807014.1 mRNA upstream 363450 39425328 ~ 39427120 (+) False LOC120563008
XM_039807013.1 mRNA upstream 363450 39425328 ~ 39427120 (+) False LOC120563008
XM_039807020.1 mRNA upstream 370897 39391948 ~ 39419673 (+) True LOC120563011
XM_039806074.1 mRNA downstream 17288 39811855 ~ 39828704 (+) True LOC120562359
XM_039806205.1 mRNA downstream 129758 39924325 ~ 39979365 (+) True LOC120562496
XM_039806075.1 mRNA downstream 288463 40083030 ~ 40093260 (+) True LOC120562361
XM_039806076.1 mRNA downstream 288463 40083030 ~ 40093260 (+) False LOC120562361
XM_039806206.1 mRNA downstream 316866 40111433 ~ 40113823 (+) True si:dkey-15h8.17
TU107036 other upstream 21720 39767927 ~ 39768850 (+) False LOC120562364
TU106769 other upstream 326729 39460448 ~ 39463841 (+) True G79722
TU106757 other upstream 336278 39433461 ~ 39454292 (+) True G79713
TU106759 other upstream 336278 39433461 ~ 39454292 (+) False G79713
TU106586 other upstream 469245 39313989 ~ 39321325 (+) False LOC120563015
TU107204 other downstream 522172 40316739 ~ 40321067 (+) True G80003
TU107169 other downstream 539795 40334362 ~ 40345060 (+) False LOC120562498
TU107236 other downstream 622511 40417078 ~ 40420429 (+) False LOC120562499
TU107237 other downstream 625302 40419869 ~ 40420429 (+) False LOC120562499
TU107235 other downstream 625412 40419979 ~ 40420429 (+) False LOC120562499

Expression Profile