RNA id: TU107075


Basic Information

Item Value
RNA id TU107075
length 286
lncRNA type read_through
GC content 0.49
exon number 2
gene id G79922
representative False

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 39791687 ~ 39943001 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

aacacacacacacacacacacacacacacacagacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaagacacagacacacacacacacacacacacacacacacacacacagacacagacacacacacacacacagacacacacacacacacagacagacacagacacacacacacacacacacacacacacacacacacaaaaacagacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU107071 lncRNA upstream 8562 39717065 ~ 39783125 (+) True G79921
TU107086 lncRNA upstream 11822 39761259 ~ 39779865 (+) True G79923
TU107065 lncRNA upstream 13593 39713213 ~ 39778094 (+) True G79918
TU107066 lncRNA upstream 13593 39713213 ~ 39778094 (+) False G79918
TU107044 lncRNA upstream 24564 39766269 ~ 39767123 (+) False LOC120562364
TU107072 lncRNA downstream 12202 39861074 ~ 39861548 (+) False G79922
TU107076 lncRNA downstream 12202 39861074 ~ 39918554 (+) True G79922
TU107102 lncRNA downstream 16905 39865777 ~ 39867761 (+) False LOC120562365
XR_005639755.1 lncRNA downstream 16912 39865784 ~ 39869961 (+) True LOC120562365
TU107113 lncRNA downstream 166687 40015559 ~ 40037161 (+) True G79944
XM_039806080.1 mRNA upstream 20267 39765173 ~ 39771420 (+) True LOC120562364
XM_039807012.1 mRNA upstream 364567 39425328 ~ 39427120 (+) True LOC120563008
XM_039807014.1 mRNA upstream 364567 39425328 ~ 39427120 (+) False LOC120563008
XM_039807013.1 mRNA upstream 364567 39425328 ~ 39427120 (+) False LOC120563008
XM_039807020.1 mRNA upstream 372014 39391948 ~ 39419673 (+) True LOC120563011
XM_039806205.1 mRNA downstream 75453 39924325 ~ 39979365 (+) True LOC120562496
XM_039806075.1 mRNA downstream 234158 40083030 ~ 40093260 (+) True LOC120562361
XM_039806076.1 mRNA downstream 234158 40083030 ~ 40093260 (+) False LOC120562361
XM_039806206.1 mRNA downstream 262561 40111433 ~ 40113823 (+) True si:dkey-15h8.17
XM_039806078.1 mRNA downstream 290861 40139733 ~ 40152085 (+) True LOC120562363
TU107036 other upstream 22837 39767927 ~ 39768850 (+) False LOC120562364
TU106769 other upstream 327846 39460448 ~ 39463841 (+) True G79722
TU106757 other upstream 337395 39433461 ~ 39454292 (+) True G79713
TU106759 other upstream 337395 39433461 ~ 39454292 (+) False G79713
TU106586 other upstream 470362 39313989 ~ 39321325 (+) False LOC120563015
TU107204 other downstream 467867 40316739 ~ 40321067 (+) True G80003
TU107169 other downstream 485490 40334362 ~ 40345060 (+) False LOC120562498
TU107236 other downstream 568206 40417078 ~ 40420429 (+) False LOC120562499
TU107237 other downstream 570997 40419869 ~ 40420429 (+) False LOC120562499
TU107235 other downstream 571107 40419979 ~ 40420429 (+) False LOC120562499

Expression Profile