RNA id: TU107127


Basic Information

Item Value
RNA id TU107127
length 304
lncRNA type sense_over
GC content 0.49
exon number 3
gene id G79953
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40030375 ~ 40099065 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacgcacacacacacacacacacacacacacacacacacacacacagagacacacacacacacacacacagacacacacacacacacacacagagacacacacacacacagagacacacacacacacacagacacacacacacacacacacactcagacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacaaacacacaaacacagacacacacacacagaaacacacacacacacacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU107079 lncRNA upstream 87374 39848532 ~ 39943001 (+) False G79922
TU107081 lncRNA upstream 111821 39803440 ~ 39918554 (+) False G79922
TU107076 lncRNA upstream 111821 39861074 ~ 39918554 (+) True G79922
XR_005639755.1 lncRNA upstream 160414 39865784 ~ 39869961 (+) True LOC120562365
TU107102 lncRNA upstream 162614 39865777 ~ 39867761 (+) False LOC120562365
TU107142 lncRNA downstream 21105 40120170 ~ 40120511 (+) True G79960
TU107168 lncRNA downstream 123308 40222373 ~ 40255520 (+) True G79982
TU107174 lncRNA downstream 123517 40222582 ~ 40377864 (+) True G79985
TU107195 lncRNA downstream 180621 40279686 ~ 40280012 (+) True G79998
TU107199 lncRNA downstream 216367 40315432 ~ 40316591 (+) True G80002
XM_039806205.1 mRNA upstream 51010 39924325 ~ 39979365 (+) True LOC120562496
XM_039806074.1 mRNA upstream 201671 39811855 ~ 39828704 (+) True LOC120562359
XM_039806203.1 mRNA upstream 226488 39781236 ~ 39803887 (+) True LOC120562494
XM_039806080.1 mRNA upstream 258955 39765173 ~ 39771420 (+) True LOC120562364
XM_039807013.1 mRNA upstream 603255 39425328 ~ 39427120 (+) False LOC120563008
XM_039806206.1 mRNA downstream 12368 40111433 ~ 40113823 (+) True si:dkey-15h8.17
XM_039806078.1 mRNA downstream 40668 40139733 ~ 40152085 (+) True LOC120562363
XM_039806086.1 mRNA downstream 169883 40268948 ~ 40289601 (+) True LOC120562376
XM_039806087.1 mRNA downstream 179131 40278196 ~ 40281752 (+) True LOC120562377
XM_039806207.1 mRNA downstream 191917 40290982 ~ 40344206 (+) True LOC120562498
TU107036 other upstream 261525 39767927 ~ 39768850 (+) False LOC120562364
TU106769 other upstream 566534 39460448 ~ 39463841 (+) True G79722
TU106757 other upstream 576083 39433461 ~ 39454292 (+) True G79713
TU106759 other upstream 576083 39433461 ~ 39454292 (+) False G79713
TU106586 other upstream 709050 39313989 ~ 39321325 (+) False LOC120563015
TU107204 other downstream 217674 40316739 ~ 40321067 (+) True G80003
TU107169 other downstream 235297 40334362 ~ 40345060 (+) False LOC120562498
TU107236 other downstream 318013 40417078 ~ 40420429 (+) False LOC120562499
TU107237 other downstream 320804 40419869 ~ 40420429 (+) False LOC120562499
TU107235 other downstream 320914 40419979 ~ 40420429 (+) False LOC120562499

Expression Profile