RNA id: TU107137


Basic Information

Item Value
RNA id TU107137
length 246
lncRNA type sense_over
GC content 0.48
exon number 3
gene id G79957
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40057013 ~ 40108481 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacacacacacacacacacacacacacacacacacacacacacacacagacacacacatacacacacacacagacacacacacacacagacacacacacacacacacagacacacacagacacacacacacacacacacagacacacagacacacagacacacacgcacacacaaacacagacacacacaaacacacacacacacacacacacaaacacacacacacaaacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU107113 lncRNA upstream 19852 40015559 ~ 40037161 (+) True G79944
TU107079 lncRNA upstream 114012 39848532 ~ 39943001 (+) False G79922
TU107081 lncRNA upstream 138459 39803440 ~ 39918554 (+) False G79922
TU107076 lncRNA upstream 138459 39861074 ~ 39918554 (+) True G79922
XR_005639755.1 lncRNA upstream 187052 39865784 ~ 39869961 (+) True LOC120562365
TU107142 lncRNA downstream 11689 40120170 ~ 40120511 (+) True G79960
TU107168 lncRNA downstream 113892 40222373 ~ 40255520 (+) True G79982
TU107174 lncRNA downstream 114101 40222582 ~ 40377864 (+) True G79985
TU107195 lncRNA downstream 171205 40279686 ~ 40280012 (+) True G79998
TU107199 lncRNA downstream 206951 40315432 ~ 40316591 (+) True G80002
XM_039806205.1 mRNA upstream 77648 39924325 ~ 39979365 (+) True LOC120562496
XM_039806074.1 mRNA upstream 228309 39811855 ~ 39828704 (+) True LOC120562359
XM_039806203.1 mRNA upstream 253126 39781236 ~ 39803887 (+) True LOC120562494
XM_039806080.1 mRNA upstream 285593 39765173 ~ 39771420 (+) True LOC120562364
XM_039807013.1 mRNA upstream 629893 39425328 ~ 39427120 (+) False LOC120563008
XM_039806206.1 mRNA downstream 2952 40111433 ~ 40113823 (+) True si:dkey-15h8.17
XM_039806078.1 mRNA downstream 31252 40139733 ~ 40152085 (+) True LOC120562363
XM_039806086.1 mRNA downstream 160467 40268948 ~ 40289601 (+) True LOC120562376
XM_039806087.1 mRNA downstream 169715 40278196 ~ 40281752 (+) True LOC120562377
XM_039806207.1 mRNA downstream 182501 40290982 ~ 40344206 (+) True LOC120562498
TU107036 other upstream 288163 39767927 ~ 39768850 (+) False LOC120562364
TU106769 other upstream 593172 39460448 ~ 39463841 (+) True G79722
TU106757 other upstream 602721 39433461 ~ 39454292 (+) True G79713
TU106759 other upstream 602721 39433461 ~ 39454292 (+) False G79713
TU106586 other upstream 735688 39313989 ~ 39321325 (+) False LOC120563015
TU107204 other downstream 208258 40316739 ~ 40321067 (+) True G80003
TU107169 other downstream 225881 40334362 ~ 40345060 (+) False LOC120562498
TU107236 other downstream 308597 40417078 ~ 40420429 (+) False LOC120562499
TU107237 other downstream 311388 40419869 ~ 40420429 (+) False LOC120562499
TU107235 other downstream 311498 40419979 ~ 40420429 (+) False LOC120562499

Expression Profile