RNA id: TU107168


Basic Information

Item Value
RNA id TU107168
length 216
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G79982
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40222373 ~ 40255520 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cacacacagacatgcatacatgcatgcacacacacacacacacacacacacacacacacgcatacatacacacacacgcatacatacacacacacacacgcatacatacacacacacacacacacacacacacccacccacacacacacaaatatacatatatacacagacacagacacacagacacacacacacacacacacacacatacagaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU107142 lncRNA upstream 101862 40120170 ~ 40120511 (+) True G79960
TU107137 lncRNA upstream 113892 40057013 ~ 40108481 (+) True G79957
TU107139 lncRNA upstream 122904 40057013 ~ 40099469 (+) False G79957
TU107127 lncRNA upstream 123308 40030375 ~ 40099065 (+) True G79953
TU107113 lncRNA upstream 185212 40015559 ~ 40037161 (+) True G79944
TU107195 lncRNA downstream 24166 40279686 ~ 40280012 (+) True G79998
TU107199 lncRNA downstream 59912 40315432 ~ 40316591 (+) True G80002
TU107207 lncRNA downstream 60518 40316038 ~ 40317625 (+) True G80004
TU107200 lncRNA downstream 61219 40316739 ~ 40319008 (+) False G80003
TU107203 lncRNA downstream 62287 40317807 ~ 40319433 (+) False G80003
XM_039806078.1 mRNA upstream 70288 40139733 ~ 40152085 (+) True LOC120562363
XM_039806206.1 mRNA upstream 108550 40111433 ~ 40113823 (+) True si:dkey-15h8.17
XM_039806075.1 mRNA upstream 129113 40083030 ~ 40093260 (+) True LOC120562361
XM_039806076.1 mRNA upstream 129113 40083030 ~ 40093260 (+) False LOC120562361
XM_039806205.1 mRNA upstream 243008 39924325 ~ 39979365 (+) True LOC120562496
XM_039806086.1 mRNA downstream 13428 40268948 ~ 40289601 (+) True LOC120562376
XM_039806087.1 mRNA downstream 22676 40278196 ~ 40281752 (+) True LOC120562377
XM_039806207.1 mRNA downstream 35462 40290982 ~ 40344206 (+) True LOC120562498
XM_039806208.1 mRNA downstream 123162 40378682 ~ 40441316 (+) True LOC120562499
XM_039806091.1 mRNA downstream 195768 40451288 ~ 40477146 (+) True LOC120562382
TU107036 other upstream 453523 39767927 ~ 39768850 (+) False LOC120562364
TU106769 other upstream 758532 39460448 ~ 39463841 (+) True G79722
TU106757 other upstream 768081 39433461 ~ 39454292 (+) True G79713
TU106759 other upstream 768081 39433461 ~ 39454292 (+) False G79713
TU106586 other upstream 901048 39313989 ~ 39321325 (+) False LOC120563015
TU107204 other downstream 61219 40316739 ~ 40321067 (+) True G80003
TU107169 other downstream 78842 40334362 ~ 40345060 (+) False LOC120562498
TU107236 other downstream 161558 40417078 ~ 40420429 (+) False LOC120562499
TU107237 other downstream 164349 40419869 ~ 40420429 (+) False LOC120562499
TU107235 other downstream 164459 40419979 ~ 40420429 (+) False LOC120562499

Expression Profile