RNA id: TU107584



Basic Information


Item Value
RNA id TU107584
length 633
RNA type TUCP
GC content 0.53
exon number 5
gene id LOC120562415
representative False

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 40678343 ~ 40765467 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TTCAGGTAtctctcctgctgctgactctagaactcatctctctcctgtcattcagCTATATAGGACACTGGGACAAAGGCAGCAGACATCAACCCAACTGAGCTCACAGAGAGGGACATCACCATCCAAGGAGGGCTACATCCTCTTACAAGGTGAGGATGACATCCACGGCAGATCGACTGGCCCGTCAGCAGGGCAGGGAACAAGGCATTGGCACAAACAAGAAAGCAGTGAAGTTCCTGCAGCAGGATTATGAGACTCTGCGCCAGCTGTGTTTGAAGAGTGGACTCCTGTTTGAGGACAAGTGCTTCCCAGCTGAGCCCACATCACTGGGCCACAAGGATCTGGGACCAGGCTCAGAAGAAACCAAGGGGGTTGTTTGGAAAAGGCCAACGGAGCTGTGCCCAAACCCAAAGTTCATTGTTGATGGAGCCACAAGGACGGACATTTGCCAAGGAGAGCTGGGGGACTGCTGGCTTCTGGCTGCAATAGCCAGTCTGACTCTAGACCAGCAGATCCTGGCTCGCGTGGTGCCCCAGGAACAGAGTTTTACTGAAGGTTACGCCGGGATATTTCACTTCCAGATCTGGCAGTTTGGTGAGTGGGTTGATGTGGTGATCGATGACCGTTTAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU107573 lncRNA downstream 3441 40673468 ~ 40674902 (-) True G80218
TU107528 lncRNA downstream 180747 40493610 ~ 40497596 (-) False G80186
TU107532 lncRNA downstream 182250 40493375 ~ 40496093 (-) False G80186
TU107592 lncRNA upstream 12028 40756840 ~ 40758517 (-) True G80229
TU107626 lncRNA upstream 65010 40809822 ~ 40810781 (-) True G80246
XR_005639787.1 lncRNA upstream 107486 40852298 ~ 40852870 (-) True LOC120562421
TU107636 lncRNA upstream 115574 40860386 ~ 40868841 (-) False G80252
TU107637 lncRNA upstream 115574 40860386 ~ 40860918 (-) False G80252
XM_039806093.1 mRNA downstream 190997 40480066 ~ 40487346 (-) False pmvk
XM_039806096.1 mRNA downstream 191003 40480066 ~ 40487340 (-) False pmvk
XM_039806095.1 mRNA downstream 191003 40480066 ~ 40487340 (-) False pmvk
XM_039806092.1 mRNA downstream 191003 40480066 ~ 40487340 (-) False pmvk
XM_039806094.1 mRNA downstream 191003 40480066 ~ 40487340 (-) True pmvk
XM_039806124.1 mRNA upstream 66423 40811235 ~ 40816555 (-) True LOC120562399
XM_039806125.1 mRNA upstream 66423 40811235 ~ 40815578 (-) False LOC120562399
XM_039806130.1 mRNA upstream 139309 40884121 ~ 40888754 (-) True LOC120562403
XM_039806212.1 mRNA upstream 654998 41399810 ~ 41409787 (-) True LOC120562505
XM_039806213.1 mRNA upstream 669662 41414474 ~ 41421025 (-) True LOC120562506
TU107529 other downstream 180747 40492323 ~ 40497596 (-) True G80186
TU107393 other downstream 370820 40222367 ~ 40307523 (-) True G80129
XR_005639766.1 other downstream 443680 40205513 ~ 40234663 (-) False LOC120562372
TU108007 other upstream 271038 41015850 ~ 41017192 (-) True G80488
TU108038 other upstream 358431 41103243 ~ 41104094 (-) True G80498
TU108084 other upstream 688229 41433041 ~ 41441698 (-) False LOC120562392
TU108083 other upstream 698422 41443234 ~ 41445525 (-) False LOC120562392
TU108072 other upstream 704983 41449795 ~ 41486017 (-) False LOC120562392

Expression Profile