RNA id: TU107699



Basic Information


Item Value
RNA id TU107699
length 552
RNA type TUCP
GC content 0.53
exon number 5
gene id polr3glb
representative False

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41156474 ~ 41186945 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CGGTGGTGGATGTAAACAAAGAGGATTTTCTGTTTCTCCGTGAGAAGAAGAAGGTTTAACTTCTGGAGACATCAACACTGAAGCTCTGCTAGGCGGTGATGGCAGGTCGAGGTGGTGGGCGGGGCCGGAGGATGATGACTTTCAGCGTGGAGGCGGTCGGCATCAACAGAGGAGACAGTTTacctccatccatccaacaACCTACACCTCTGTTTcctgtgatgGAGCAGAAGCCCCTCCCCCTGACAgctggtgaggaggaggagtatCTGTTGGCTCTCAAACAGGAGTTCAGAGGAGCGATGAAGAGTCTGCCGTGCTTCATCCAACCGGCAGCTGCACACCGAGaTGTGGAGAGATACTCTGATAAATACCACAGCACCGAGCAGACAGACGCCCTGACCGACTGGACTCCAGACTGGAAAAGATTACCGAAAGAACTCAGGGTGAAGAAACCTTCCAGAGGAggtgagtacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005639779.1 lncRNA upstream 40555 41135950 ~ 41136174 (+) True LOC120562412
TU107662 lncRNA upstream 69003 41068184 ~ 41107726 (+) True G80265
XR_005639774.1 lncRNA upstream 84815 41091477 ~ 41091914 (+) True LOC120562408
TU107680 lncRNA upstream 131337 41044777 ~ 41045392 (+) True G80280
XR_005639784.1 lncRNA upstream 195102 40979110 ~ 40981627 (+) True LOC120562417
TU107725 lncRNA downstream 32854 41215521 ~ 41474414 (+) True G80299
TU107739 lncRNA downstream 131044 41313711 ~ 41347897 (+) True G80306
TU107752 lncRNA downstream 165915 41348582 ~ 41402166 (+) False G80318
TU107758 lncRNA downstream 177792 41360459 ~ 41362553 (+) True G80321
TU107761 lncRNA downstream 180012 41362679 ~ 41363468 (+) True G80322
XM_039806109.1 mRNA upstream 1883 41163743 ~ 41174846 (+) True LOC120562391
XM_039806110.1 mRNA upstream 1883 41163743 ~ 41174846 (+) False LOC120562391
XM_039806111.1 mRNA upstream 1883 41163743 ~ 41174846 (+) False LOC120562391
XM_039806123.1 mRNA upstream 26727 41147864 ~ 41150002 (+) True LOC120562397
XM_039806128.1 mRNA upstream 72946 41102048 ~ 41103783 (+) True LOC120562401
XM_039806101.1 mRNA downstream 37417 41220084 ~ 41294381 (+) True LOC120562388
XM_039806102.1 mRNA downstream 37417 41220084 ~ 41294381 (+) False LOC120562388
XM_039806103.1 mRNA downstream 37417 41220084 ~ 41294381 (+) False LOC120562388
XM_039806106.1 mRNA downstream 56416 41239083 ~ 41319704 (+) True LOC120562390
XM_039806107.1 mRNA downstream 56416 41239083 ~ 41319704 (+) False LOC120562390
TU107703 other upstream 13035 41156474 ~ 41163694 (+) False polr3glb
XR_005639771.1 other upstream 164110 41007967 ~ 41012619 (+) True LOC120562400
XR_005639770.1 other upstream 520162 40645659 ~ 40656567 (+) True LOC120562387
TU107236 other upstream 756300 40417078 ~ 40420429 (+) False LOC120562499
TU107756 other downstream 173813 41356480 ~ 41360206 (+) True G80320
TU107784 other downstream 238689 41421356 ~ 41422578 (+) True G80337
TU107787 other downstream 238689 41421356 ~ 41422578 (+) False G80337
TU107913 other downstream 756831 41939498 ~ 42004616 (+) False G80410
TU107914 other downstream 820706 42003373 ~ 42006594 (+) True G80410

Expression Profile