RNA id: TU107752


Basic Information

Item Value
RNA id TU107752
length 214
lncRNA type sense_over
GC content 0.45
exon number 3
gene id G80318
representative False

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41348582 ~ 41402166 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tctccttctcacacacacacacacacacacacacacacacaaacacacacacacacacacacacacaaacacacacacacaaacacacacaaacacacacacaaacacacacacacacacacacacacacacacacacaaacacacacacacacacacacacacacacaaaaacacaaacacacaaacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU107739 lncRNA upstream 685 41313711 ~ 41347897 (+) True G80306
XR_005639779.1 lncRNA upstream 212408 41135950 ~ 41136174 (+) True LOC120562412
TU107662 lncRNA upstream 240856 41068184 ~ 41107726 (+) True G80265
XR_005639774.1 lncRNA upstream 256668 41091477 ~ 41091914 (+) True LOC120562408
TU107680 lncRNA upstream 303190 41044777 ~ 41045392 (+) True G80280
TU107785 lncRNA downstream 19793 41421959 ~ 41456358 (+) False G80337
TU107788 lncRNA downstream 19793 41421959 ~ 41422578 (+) False G80337
TU107790 lncRNA downstream 30880 41433046 ~ 41433547 (+) True G80339
TU107723 lncRNA downstream 70442 41472608 ~ 41598153 (+) False G80299
TU107800 lncRNA downstream 82406 41484572 ~ 41486069 (+) True G80346
XM_039806106.1 mRNA upstream 28878 41239083 ~ 41319704 (+) True LOC120562390
XM_039806107.1 mRNA upstream 28878 41239083 ~ 41319704 (+) False LOC120562390
XM_039806101.1 mRNA upstream 54201 41220084 ~ 41294381 (+) True LOC120562388
XM_039806102.1 mRNA upstream 54201 41220084 ~ 41294381 (+) False LOC120562388
XM_039806103.1 mRNA upstream 54201 41220084 ~ 41294381 (+) False LOC120562388
XM_039806131.1 mRNA downstream 98019 41500185 ~ 41501659 (+) True LOC120562404
XM_039806120.1 mRNA downstream 138924 41541090 ~ 41545594 (+) False LOC120562396
XM_039806122.1 mRNA downstream 139764 41541930 ~ 41545594 (+) True LOC120562396
XM_039806117.1 mRNA downstream 139764 41541930 ~ 41545594 (+) False LOC120562396
XM_039806115.1 mRNA downstream 139764 41541930 ~ 41545594 (+) False LOC120562396
TU107708 other upstream 165915 41156474 ~ 41182667 (+) False polr3glb
TU107699 other upstream 165915 41176729 ~ 41182667 (+) False polr3glb
TU107703 other upstream 184888 41156474 ~ 41163694 (+) False polr3glb
XR_005639771.1 other upstream 335963 41007967 ~ 41012619 (+) True LOC120562400
XR_005639770.1 other upstream 692015 40645659 ~ 40656567 (+) True LOC120562387
TU107784 other downstream 19190 41421356 ~ 41422578 (+) True G80337
TU107787 other downstream 19190 41421356 ~ 41422578 (+) False G80337
TU107913 other downstream 537332 41939498 ~ 42004616 (+) False G80410
TU107914 other downstream 601207 42003373 ~ 42006594 (+) True G80410
TU108350 other downstream 1083169 42485335 ~ 42486009 (+) True G80682

Expression Profile