RNA id: TU107808


Basic Information

Item Value
RNA id TU107808
length 259
lncRNA type inter_gene
GC content 0.48
exon number 2
gene id G80351
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41502345 ~ 41503240 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cacagacacacacacacacacacagacacacacacagacacacacacacacacacacacacactcacatacacacacacacacacacacacacacacacatacacacacacacacacacacacacacactcacatacacacacacacacacacacacacacacaaacacacacacacacacacacacacacacacacacacacacacacacacaacacatacacacacacacacacacacagacacacacacacaccac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU107804 lncRNA upstream 9692 41491844 ~ 41492653 (+) True G80348
TU107800 lncRNA upstream 16276 41484572 ~ 41486069 (+) True G80346
TU107785 lncRNA upstream 45987 41421959 ~ 41456358 (+) False G80337
TU107790 lncRNA upstream 68798 41433046 ~ 41433547 (+) True G80339
TU107788 lncRNA upstream 79767 41421959 ~ 41422578 (+) False G80337
XR_005639788.1 lncRNA downstream 25823 41529063 ~ 41530064 (+) True LOC120562422
XR_005639786.1 lncRNA downstream 35770 41539010 ~ 41539592 (+) True LOC120562420
TU107841 lncRNA downstream 110860 41614100 ~ 41615261 (+) True G80364
TU107842 lncRNA downstream 113669 41616909 ~ 41617366 (+) True G80365
TU107834 lncRNA downstream 134898 41638138 ~ 41680108 (+) False G80363
XM_039806131.1 mRNA upstream 686 41500185 ~ 41501659 (+) True LOC120562404
XM_039806104.1 mRNA upstream 115016 41377447 ~ 41387329 (+) True LOC120562389
XM_039806106.1 mRNA upstream 182641 41239083 ~ 41319704 (+) True LOC120562390
XM_039806107.1 mRNA upstream 182641 41239083 ~ 41319704 (+) False LOC120562390
XM_039806103.1 mRNA upstream 207964 41220084 ~ 41294381 (+) False LOC120562388
XM_039806120.1 mRNA downstream 37850 41541090 ~ 41545594 (+) False LOC120562396
XM_039806122.1 mRNA downstream 38690 41541930 ~ 41545594 (+) True LOC120562396
XM_039806117.1 mRNA downstream 38690 41541930 ~ 41545594 (+) False LOC120562396
XM_039806115.1 mRNA downstream 38690 41541930 ~ 41545594 (+) False LOC120562396
XM_039806118.1 mRNA downstream 38690 41541930 ~ 41545594 (+) False LOC120562396
TU107784 other upstream 79767 41421356 ~ 41422578 (+) True G80337
TU107787 other upstream 79767 41421356 ~ 41422578 (+) False G80337
TU107756 other upstream 142139 41356480 ~ 41360206 (+) True G80320
TU107708 other upstream 319678 41156474 ~ 41182667 (+) False polr3glb
TU107913 other downstream 436258 41939498 ~ 42004616 (+) False G80410
TU107914 other downstream 500133 42003373 ~ 42006594 (+) True G80410
TU108350 other downstream 982095 42485335 ~ 42486009 (+) True G80682
XR_005639823.1 other downstream 1029684 42532924 ~ 42538282 (+) False LOC120562757
XR_005639822.1 other downstream 1030180 42533420 ~ 42538282 (+) False LOC120562757

Expression Profile