RNA id: TU107836


Basic Information

Item Value
RNA id TU107836
length 373
lncRNA type sense_over
GC content 0.50
exon number 3
gene id G80363
representative False

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41638138 ~ 41697410 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgtctgtgtgtctgtgtctgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtctgtctgtctgtgtgtgtctgtctgtgtctgtctgtctctgtctgtctgtctgtgtgtgtctgtctgtgtctgtctctgtgtctgtctctgtgtctgtctctgtgtgtgtgtgtgtctgtctgtctgtgtgtgtctgtctgtgtgtgtgtgtctgtgtgtgtgtgtctgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtatatgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU107842 lncRNA upstream 20772 41616909 ~ 41617366 (+) True G80365
TU107841 lncRNA upstream 22877 41614100 ~ 41615261 (+) True G80364
XR_005639786.1 lncRNA upstream 98546 41539010 ~ 41539592 (+) True LOC120562420
XR_005639788.1 lncRNA upstream 108074 41529063 ~ 41530064 (+) True LOC120562422
TU107808 lncRNA upstream 134898 41502345 ~ 41503240 (+) True G80351
XR_005639617.1 lncRNA downstream 14860 41711655 ~ 41717691 (+) True LOC120561593
XR_005639616.1 lncRNA downstream 68006 41764801 ~ 41768650 (+) True LOC120561592
TU107893 lncRNA downstream 181966 41878761 ~ 41879073 (+) True G80402
TU107896 lncRNA downstream 199123 41895918 ~ 41977583 (+) False G80405
TU107899 lncRNA downstream 199123 41895918 ~ 41989851 (+) True G80405
XM_039806133.1 mRNA upstream 61635 41551091 ~ 41576503 (+) True LOC120562406
XM_039806115.1 mRNA upstream 92544 41541930 ~ 41545594 (+) False LOC120562396
XM_039804728.1 mRNA downstream 30771 41727566 ~ 41850702 (+) True LOC120561585
XM_039806643.1 mRNA downstream 830701 42527496 ~ 42529482 (+) True LOC120562755
XM_039806644.1 mRNA downstream 836129 42532924 ~ 42539601 (+) True LOC120562757
XM_039806645.1 mRNA downstream 838897 42535692 ~ 42538282 (+) False LOC120562757
XM_039806658.1 mRNA downstream 939030 42635825 ~ 42643990 (+) True LOC120562767
TU107784 other upstream 215560 41421356 ~ 41422578 (+) True G80337
TU107787 other upstream 215560 41421356 ~ 41422578 (+) False G80337
TU107756 other upstream 277932 41356480 ~ 41360206 (+) True G80320
TU107708 other upstream 455471 41156474 ~ 41182667 (+) False polr3glb
TU107913 other downstream 242703 41939498 ~ 42004616 (+) False G80410
TU107914 other downstream 306578 42003373 ~ 42006594 (+) True G80410
TU108350 other downstream 788540 42485335 ~ 42486009 (+) True G80682
XR_005639823.1 other downstream 836129 42532924 ~ 42538282 (+) False LOC120562757
XR_005639822.1 other downstream 836625 42533420 ~ 42538282 (+) False LOC120562757

Expression Profile