RNA id: TU108133



Basic Information


Item Value
RNA id TU108133
length 254
lncRNA type read_through
GC content 0.50
exon number 2
gene id G80557
representative False

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41347095 ~ 41435161 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ctctgtctctctgtctctctgtctctctctctgtctctctctctctgtctctctctctctctgtctctctctctgtctcttgtctctctgtctctgtctctctgtctctgtctctctctctctctctctctgtctctctctctctgtctctctgtctctctctctctgtctctctctctctgtctctctgtctctctctctctctgtctctctgtctctctctctctgtctctctctctctctctctctctctg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU108050 lncRNA downstream 92878 41186453 ~ 41254217 (-) True G80508
XR_005639780.1 lncRNA downstream 136449 41209092 ~ 41210646 (-) False LOC120562413
TU108069 lncRNA downstream 136451 41209030 ~ 41210644 (-) True LOC120562413
TU108068 lncRNA downstream 144864 41201771 ~ 41202231 (-) True G80526
TU108054 lncRNA downstream 160865 41157964 ~ 41186230 (-) True G80512
TU108077 lncRNA upstream 49406 41484567 ~ 41486017 (-) False LOC120562392
TU108180 lncRNA upstream 56893 41492054 ~ 41492753 (-) True G80580
TU108205 lncRNA upstream 175820 41610981 ~ 41611190 (-) True G80603
TU108173 lncRNA upstream 202976 41638137 ~ 41995485 (-) False LOC120562507
TU108174 lncRNA upstream 203161 41638322 ~ 41678645 (-) False LOC120562507
XM_039806130.1 mRNA downstream 458341 40884121 ~ 40888754 (-) True LOC120562403
XM_039806124.1 mRNA downstream 530540 40811235 ~ 40816555 (-) True LOC120562399
XM_039806125.1 mRNA downstream 531517 40811235 ~ 40815578 (-) False LOC120562399
XM_039806092.1 mRNA downstream 859755 40480066 ~ 40487340 (-) False pmvk
XM_039806112.1 mRNA upstream 8675 41443836 ~ 41486299 (-) False LOC120562392
XM_039806114.1 mRNA upstream 37447 41472608 ~ 41605388 (-) False LOC120562392
XM_039806113.1 mRNA upstream 37447 41472608 ~ 41486098 (-) True LOC120562392
XM_039806895.1 mRNA upstream 179748 41614909 ~ 41660714 (-) True myo1eb
XM_039806214.1 mRNA upstream 228709 41663870 ~ 41998703 (-) True LOC120562507
TU108038 other downstream 243001 41103243 ~ 41104094 (-) True G80498
TU108007 other downstream 329903 41015850 ~ 41017192 (-) True G80488
TU107585 other downstream 581628 40678343 ~ 40765467 (-) True LOC120562415
TU107584 other downstream 602283 40678343 ~ 40744812 (-) False LOC120562415
TU107582 other downstream 665637 40678343 ~ 40681458 (-) False LOC120562415
TU108083 other upstream 8073 41443234 ~ 41445525 (-) False LOC120562392
TU108072 other upstream 14634 41449795 ~ 41486017 (-) False LOC120562392
TU108294 other upstream 562836 41997997 ~ 41998854 (-) False LOC120562507
TU108298 other upstream 665028 42100189 ~ 42108573 (-) True G80637
TU108269 other upstream 686230 42121391 ~ 42423380 (-) False LOC120562509

Expression Profile