RNA id: TU108205



Basic Information


Item Value
RNA id TU108205
length 210
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G80603
representative True

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 41610981 ~ 41611190 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


aggaaatacactgggggaaaaaacataaggactccggggagtaaactccccagaacctaggattaataacaagcatttctgggacgggatgcacacaaatggtaatagaaagggagaggagagagcagctcagtgtgtcaaaggaaggaagtcccccggcagtctagaactataacagcgtaattaagagagacaggtcataaggagagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU108155 lncRNA downstream 108712 41421277 ~ 41502269 (-) True G80572
TU108180 lncRNA downstream 118228 41492054 ~ 41492753 (-) True G80580
TU108077 lncRNA downstream 124964 41484567 ~ 41486017 (-) False LOC120562392
TU108150 lncRNA downstream 154623 41412467 ~ 41456358 (-) True G80568
TU108135 lncRNA downstream 176435 41366381 ~ 41434546 (-) True G80557
TU108173 lncRNA upstream 26947 41638137 ~ 41995485 (-) False LOC120562507
TU108174 lncRNA upstream 27132 41638322 ~ 41678645 (-) False LOC120562507
TU108160 lncRNA upstream 37188 41648378 ~ 41664092 (-) False LOC120562507
TU108158 lncRNA upstream 43811 41655001 ~ 41664092 (-) False LOC120562507
TU108161 lncRNA upstream 43811 41655001 ~ 41664092 (-) False LOC120562507
XM_039806114.1 mRNA downstream 5593 41472608 ~ 41605388 (-) False LOC120562392
XM_039806112.1 mRNA downstream 124682 41443836 ~ 41486299 (-) False LOC120562392
XM_039806113.1 mRNA downstream 124883 41472608 ~ 41486098 (-) True LOC120562392
XM_039806213.1 mRNA downstream 189956 41414474 ~ 41421025 (-) True LOC120562506
XM_039806212.1 mRNA downstream 201194 41399810 ~ 41409787 (-) True LOC120562505
XM_039806895.1 mRNA upstream 3719 41614909 ~ 41660714 (-) True myo1eb
XM_039806214.1 mRNA upstream 52680 41663870 ~ 41998703 (-) True LOC120562507
XM_039804733.1 mRNA upstream 392662 42003852 ~ 42047544 (-) True selenbp1
XM_039806215.1 mRNA upstream 440785 42051975 ~ 42057548 (-) True LOC120562508
XM_039806216.1 mRNA upstream 624451 42235641 ~ 42281631 (-) True LOC120562509
TU108072 other downstream 124964 41449795 ~ 41486017 (-) False LOC120562392
TU108083 other downstream 165456 41443234 ~ 41445525 (-) False LOC120562392
TU108084 other downstream 169283 41433041 ~ 41441698 (-) False LOC120562392
TU108038 other downstream 506887 41103243 ~ 41104094 (-) True G80498
TU108007 other downstream 593789 41015850 ~ 41017192 (-) True G80488
TU108294 other upstream 386807 41997997 ~ 41998854 (-) False LOC120562507
TU108298 other upstream 488999 42100189 ~ 42108573 (-) True G80637
TU108269 other upstream 510201 42121391 ~ 42423380 (-) False LOC120562509
TU108259 other upstream 511584 42122774 ~ 42250558 (-) False LOC120562509
TU108234 other upstream 512559 42123749 ~ 42423380 (-) False LOC120562509

Expression Profile