RNA id: TU108236


Basic Information

Item Value
RNA id TU108236
length 351
lncRNA type read_through
GC content 0.46
exon number 3
gene id LOC120562509
representative False

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 42110980 ~ 42453873 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TACTGGTTAAATTTCCTCAGATTATAAATCTAGACCCCACTACTAAAGGTGTAGGTGGTAAACAAGAAGAAACTCTCAACAGTGGAATTCCTGAAAAATATTTGGTCGAAACGCACCTACTAGCACCCAGATCTCAGTGACAGggagaGAACAAGTTTCTACGCTGGTGGAGAACGCCATTAATGGGGACTCTATCGGTACTCTGATCCGCCAGCCCAGTGGATGTGGAGAGCAAAACATTGCTAGGACGACCCTACCAGTCATTGCAGCCACATATTTGGACAAAACCAACCAGTGGGAAACTTTGAGCGTTCAGAAACGTAACGAAGCCCTCCAACACATCAAGACCGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU108296 lncRNA downstream 21713 42050816 ~ 42113814 (-) True G80635
TU108306 lncRNA downstream 51191 42083832 ~ 42084336 (-) True G80641
TU108303 lncRNA downstream 53705 42079561 ~ 42081822 (-) True G80639
TU108299 lncRNA downstream 73699 42061160 ~ 42061828 (-) True G80638
TU108280 lncRNA downstream 76312 41940115 ~ 42059215 (-) True G80628
TU108349 lncRNA upstream 60427 42483807 ~ 42484122 (-) True G80681
TU108354 lncRNA upstream 65050 42488430 ~ 42488689 (-) True G80686
TU108356 lncRNA upstream 66152 42489532 ~ 42489782 (-) True G80688
TU108363 lncRNA upstream 84310 42507690 ~ 42509778 (-) False LOC120562756
TU108364 lncRNA upstream 84310 42507690 ~ 42511019 (-) True LOC120562756
XM_039806215.1 mRNA downstream 77979 42051975 ~ 42057548 (-) True LOC120562508
XM_039804733.1 mRNA downstream 87983 42003852 ~ 42047544 (-) True selenbp1
XM_039806214.1 mRNA downstream 136824 41663870 ~ 41998703 (-) True LOC120562507
XM_039806895.1 mRNA downstream 474813 41614909 ~ 41660714 (-) True myo1eb
XM_039806113.1 mRNA downstream 649429 41472608 ~ 41486098 (-) True LOC120562392
XM_039806657.1 mRNA upstream 196523 42619903 ~ 42623838 (-) False LOC120562764
XM_039806656.1 mRNA upstream 196523 42619903 ~ 42623838 (-) True LOC120562764
XM_039806218.1 mRNA upstream 226069 42649449 ~ 42656684 (-) True LOC120562512
XM_039806219.1 mRNA upstream 510712 42934092 ~ 42955865 (-) True LOC120562513
TU108273 other downstream 7866 42123749 ~ 42127661 (-) False LOC120562509
TU108298 other downstream 26954 42100189 ~ 42108573 (-) True G80637
TU108294 other downstream 136673 41997997 ~ 41998854 (-) False LOC120562507
TU108072 other downstream 649510 41449795 ~ 41486017 (-) False LOC120562392
TU108083 other downstream 690002 41443234 ~ 41445525 (-) False LOC120562392
TU108534 other upstream 252561 42675941 ~ 42770763 (-) True G80778
TU108571 other upstream 483154 42906534 ~ 42955851 (-) False LOC120562513

Expression Profile