RNA id: TU93169


Basic Information

Item Value
RNA id TU93169
length 655
lncRNA type inter_gene
GC content 0.40
exon number 4
gene id G69532
representative False

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 58628 ~ 60100 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTGAAGTTCAGGTGTGCTCCGGTCAGAGCTCAGCATGGCTCAGAACACAAATGATGGTGCTACGctaCAACATTGTTGTCTTTGGTGATATTGACGTTTTTTCCCGTAAGATAATATATCTTGGTGCAACCTCCAACAACCTTGCATCAACCACACCCTGGCTTTCTTCCTACAATCTGTTGAGAAGTTTGGGTTTCCTCTCAGGGCATGGATATTCTTGACATTGAGTGGGAAAACAGCAGACTTCCATTTGATGACCAGTCGAGCATCATTGTTCCAGACACAGCATGCCCCCTGACCGTCGGACAAATGACAGCAGTCCTTGTGCTGCGATACTTACATTGCTGCTGTTCAATTTTGTGAGCAGCTTCTTGCTCTGTGAAAGAACTGATCAGAATGACTTAAGTTTTGAGTTGAGAGAGACAATAATTTTTTGCATGATCTGaattgtattattgttattgctTTGGCAAGACAAGGGAAAAGAGGAAGGTGCAGCAtagtaacattaaaaaaatgaaaccagTCCAGTTCATTTTACTTTAGCTGCCATTAAAACTAATataatggtttcaaaaccatATCCTGACTAATCAATAACATATACCAGTCAGTGATTATCCACAAACATAGGTtcatctgatcttaactataa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93176 lncRNA upstream 94974 155074 ~ 155292 (-) True G69539
TU93185 lncRNA upstream 157728 217828 ~ 233498 (-) True G69541
TU93218 lncRNA upstream 186588 246688 ~ 246940 (-) True G69564
TU93271 lncRNA upstream 282487 342587 ~ 343038 (-) True G69615
TU93309 lncRNA upstream 744950 805050 ~ 805302 (-) True G69650
XM_039805286.1 mRNA upstream 97157 157257 ~ 178298 (-) True LOC120561943
XM_039805287.1 mRNA upstream 97157 157257 ~ 178297 (-) False LOC120561943
XM_039805638.1 mRNA upstream 235407 295507 ~ 321882 (-) True spag1b
XM_039805639.1 mRNA upstream 235407 295507 ~ 320816 (-) False spag1b
XM_039805631.1 mRNA upstream 284438 344538 ~ 724566 (-) False LOC120562122
unassigned_transcript_293 other downstream 30019 28610 ~ 28683 (-) True trnai-aau_14
unassigned_transcript_292 other downstream 30376 28254 ~ 28326 (-) True trnar-ucg_8
unassigned_transcript_291 other downstream 31385 27245 ~ 27317 (-) True trnar-ucg_7
unassigned_transcript_290 other downstream 32072 26557 ~ 26630 (-) True trnai-aau_13
unassigned_transcript_289 other downstream 32430 26200 ~ 26272 (-) True trnar-ucg_6
TU93283 other upstream 669824 729924 ~ 732748 (-) False osr2
TU94269 other upstream 3569033 3629133 ~ 3629818 (-) True G70407
XR_005639920.1 other upstream 3919211 3979311 ~ 3979414 (-) True LOC120563202
TU94368 other upstream 4012224 4072324 ~ 4077779 (-) False eny2
TU94369 other upstream 4012224 4072324 ~ 4077779 (-) False eny2

Expression Profile