RNA id: TU95077


Basic Information

Item Value
RNA id TU95077
length 374
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G71080
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 7506833 ~ 7511829 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATTCAAAGAGTGTTAGCTTTGAGTTCCACCAGGGTGACTGGAGCAACGATCAAGCGGAGATGGTCTGTTGAGCCGGGGTAGAGATACAGGTCTTGATTGCAGAGGAGAGGCAGATGTGCGCAGCGGGAGACGGTGATGACGGGATGGTAACCAGGTGCGCTCAATCAGCTGGCAGCAGCAGTGGGAGGGGGAGAGCAGAgtaggcacagagagagagacaggccaacagaaaaacacagaggagagaaaaccAACCGAGAAACGAAATAGAGAATAGTAAACCAAAATAGAGAATAGTAAACAAAACAGGAAACTCACAGCCatgctattactttttttgactttctatactatgactttttatgactttttcg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU95070 lncRNA upstream 6672 7496535 ~ 7500161 (+) False znrf2b
TU95067 lncRNA upstream 86936 7419697 ~ 7419897 (+) True G71072
TU95049 lncRNA upstream 130553 7374401 ~ 7376280 (+) True G71054
TU95032 lncRNA upstream 203719 7302425 ~ 7303114 (+) False G71041
TU95033 lncRNA upstream 203742 7300359 ~ 7303091 (+) True G71041
TU95080 lncRNA downstream 1747 7513576 ~ 7520041 (+) True G71081
TU95087 lncRNA downstream 3602 7515431 ~ 7521380 (+) False G71082
XR_005639713.1 lncRNA downstream 25799 7537628 ~ 7538242 (+) True LOC120562239
TU95097 lncRNA downstream 30620 7542449 ~ 7559399 (+) True G71090
TU95098 lncRNA downstream 55278 7567107 ~ 7567414 (+) True G71091
XM_039806230.1 mRNA upstream 6651 7456779 ~ 7500182 (+) True znrf2b
XM_039806231.1 mRNA upstream 23225 7456767 ~ 7483608 (+) False znrf2b
XM_039805594.1 mRNA upstream 208591 7295946 ~ 7298242 (+) True fzd1
XM_039805600.1 mRNA upstream 214398 7086008 ~ 7292435 (+) False cdk14
XM_039805052.1 mRNA downstream 153409 7665238 ~ 7707591 (+) True LOC120561797
XM_039805054.1 mRNA downstream 219997 7731826 ~ 7741034 (+) True LOC120561799
XM_039805059.1 mRNA downstream 255930 7767759 ~ 7783482 (+) False rbm42
XM_039805058.1 mRNA downstream 257961 7769790 ~ 7783482 (+) True rbm42
XM_039807228.1 mRNA downstream 373868 7885697 ~ 7904575 (+) True LOC120563115
TU94835 other upstream 1545979 5960455 ~ 5960854 (+) True G70894
XR_005639717.1 other upstream 1913784 5591199 ~ 5593049 (+) False si:ch211-198c19.1
XR_005639716.1 other upstream 2088912 5336214 ~ 5417921 (+) False LOC120562244
TU94562 other upstream 2840727 4665784 ~ 4666106 (+) True G70654
unassigned_transcript_306 other upstream 3393552 4113209 ~ 4113281 (+) True trnar-ucg_13
TU95170 other downstream 219193 7731022 ~ 7801380 (+) True G71147
TU95377 other downstream 609772 8121601 ~ 8122239 (+) True G71309
XR_005639665.1 other downstream 771552 8283381 ~ 8309744 (+) True ano10a
XR_005639664.1 other downstream 771552 8283381 ~ 8309744 (+) False ano10a
TU95565 other downstream 1237114 8748943 ~ 8751443 (+) True G71470

Expression Profile