RNA id: TU95252


Basic Information

Item Value
RNA id TU95252
length 237
lncRNA type sense_over
GC content 0.62
exon number 2
gene id G71211
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 8049035 ~ 8059805 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ggggggggggggggggggggggggtgggggtGTCAGAGGTTGCTGTTGAGGCTCATTTGCGTTGAACTTGTGTGAAGGATGAGGGCAGCTGGATGGGCTGCTGGACAGACTGGAAGGGCTGGACAGACTGGACGGGTTTCTTGCGTGATTCTGGGGAAACCCTCTGGACCACCACAGGCAGCAGCTGGTTCCGTTTGATGATCTGCAGGGCCAGCTGGGTGTTTCCTGAGGACGCCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU95236 lncRNA upstream 1366 8046950 ~ 8047669 (+) True G71200
TU95237 lncRNA upstream 1449 8046950 ~ 8047586 (+) False G71200
TU95238 lncRNA upstream 1449 8046972 ~ 8047586 (+) False G71200
TU95242 lncRNA upstream 68129 7972862 ~ 7980906 (+) True G71204
TU95206 lncRNA upstream 173435 7871517 ~ 7875600 (+) False G71176
TU95239 lncRNA downstream 305 8060110 ~ 8060801 (+) True G71201
TU95261 lncRNA downstream 8250 8068055 ~ 8069124 (+) True G71220
TU95269 lncRNA downstream 43479 8103284 ~ 8111425 (+) False G71226
TU95270 lncRNA downstream 50081 8109886 ~ 8111425 (+) True G71226
TU95374 lncRNA downstream 67894 8127699 ~ 8152466 (+) True G71306
XM_039806873.1 mRNA upstream 2357 8029682 ~ 8046678 (+) True gpd1l
XM_039807228.1 mRNA upstream 144460 7885697 ~ 7904575 (+) True LOC120563115
XM_039805059.1 mRNA upstream 265553 7767759 ~ 7783482 (+) False rbm42
XM_039805058.1 mRNA upstream 265553 7769790 ~ 7783482 (+) True rbm42
XM_039805054.1 mRNA upstream 308001 7731826 ~ 7741034 (+) True LOC120561799
XM_039804939.1 mRNA downstream 24095 8083900 ~ 8089659 (+) True LOC120561723
XM_039804938.1 mRNA downstream 31847 8091652 ~ 8096292 (+) True LOC120561722
XM_039804940.1 mRNA downstream 36556 8096361 ~ 8104392 (+) True LOC120561724
XM_039805231.1 mRNA downstream 44444 8104249 ~ 8104849 (+) True LOC120561897
XM_039804941.1 mRNA downstream 45059 8104864 ~ 8109365 (+) True LOC120561725
TU95170 other upstream 247655 7731022 ~ 7801380 (+) True G71147
TU94835 other upstream 2088181 5960455 ~ 5960854 (+) True G70894
XR_005639717.1 other upstream 2455986 5591199 ~ 5593049 (+) False si:ch211-198c19.1
XR_005639716.1 other upstream 2631114 5336214 ~ 5417921 (+) False LOC120562244
TU94562 other upstream 3382929 4665784 ~ 4666106 (+) True G70654
TU95377 other downstream 61796 8121601 ~ 8122239 (+) True G71309
XR_005639665.1 other downstream 223576 8283381 ~ 8309744 (+) True ano10a
XR_005639664.1 other downstream 223576 8283381 ~ 8309744 (+) False ano10a
TU95565 other downstream 689138 8748943 ~ 8751443 (+) True G71470
unassigned_transcript_307 other downstream 750546 8810351 ~ 8810439 (+) True trnay-gua_1

Expression Profile