RNA id: TU96452



Basic Information


Item Value
RNA id TU96452
length 747
RNA type TUCP
GC content 0.52
exon number 3
gene id G72204
representative True

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 13124934 ~ 13125897 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CCTCCTTTCACATACCCAAGCATTTTAACTAGAGCTGGTATTCCTCCAGACTTGAAAATGGCCAGCAAACCCTCTCTGTGATGGGACAGGTTGTGGAGTGTTCCTGCGGTGCAGCGAGCTGTCTCCACATCATTTGTGTTCTGCATGGTCCTGACAATAGCAGACACCATCTGAGGAGAGCGCATAATGGCGTGGCGAGAAGCTTCTTTCTTTGAAAGCTGGTGGACCATTACTGCTGCTTTGTTTACTACAACCTGGTCCTCATCATTGAGTAGTTTGGTGAGTTCTGGTATGGCTCTGGTTGCCAGCTCAGCGTCATCTTGGTAGTTGATCAGATTGACCACAGCATGTTTGAGCATTTGCGAGGGCTCTGCCAGCCTCTGAACGTTGGTGGGGTTTGCTGCATCATACTGTGTGGAGGGGATCTGCATGCCCTCCTCAAGAGTCTCTGGGAACATCGCTGCACGCACCCGCTGGGCACGTGTCATGGCATACTGACCATCTATGTCTTGTACTTGTTCCTGGGCAAAGTTCTGGTTGAAGCCCTGCTCCCACTCATACATGACCTGGTTGTCGACATCGTCTTCCTCAGGGTTGCCCTTCCCACTAAGGGAGGGAGCGGTTGTGGTGGCCCCTGAATGGATGCCTGAATCCAGGTAAGACTGTTGCTGCCAGTGACTGACTGCTGCCTTACGGTCCGGCTCCATGGCCATGTCGAGCTCCATCAGATCAGCTGGAAAGAGAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU96447 lncRNA upstream 407 13119637 ~ 13124527 (+) True G72199
TU96443 lncRNA upstream 4833 13112215 ~ 13120101 (+) False G72198
TU96444 lncRNA upstream 4833 13112215 ~ 13120101 (+) True G72198
TU96413 lncRNA upstream 178946 12896310 ~ 12945988 (+) True LOC120562936
XR_005639883.1 lncRNA upstream 179373 12896427 ~ 12945561 (+) False LOC120562936
TU96504 lncRNA downstream 82931 13208828 ~ 13209034 (+) True G72242
TU96524 lncRNA downstream 119821 13245718 ~ 13250107 (+) False hint3
XR_005639803.1 lncRNA downstream 319969 13445866 ~ 13448239 (+) True LOC120562636
TU96597 lncRNA downstream 345854 13471751 ~ 13473470 (+) True G72309
TU96603 lncRNA downstream 349473 13475370 ~ 13483111 (+) True G72314
XM_039806747.1 mRNA upstream 24465 12998150 ~ 13100469 (+) False ulk4
XM_039806750.1 mRNA upstream 24465 12998173 ~ 13100469 (+) False ulk4
XM_039806745.1 mRNA upstream 24465 12998174 ~ 13100469 (+) False ulk4
XM_039806749.1 mRNA upstream 24465 12998174 ~ 13100469 (+) False ulk4
XM_039806751.1 mRNA upstream 24465 12998175 ~ 13100469 (+) False ulk4
XM_039804903.1 mRNA downstream 85682 13211579 ~ 13215355 (+) False cmtm8b
XM_039804904.1 mRNA downstream 85686 13211583 ~ 13215355 (+) True cmtm8b
XM_039804685.1 mRNA downstream 113217 13239114 ~ 13243225 (+) False LOC120561555
XM_039804684.1 mRNA downstream 113342 13239239 ~ 13243225 (+) False LOC120561555
XM_039804686.1 mRNA downstream 114570 13240467 ~ 13243225 (+) True LOC120561555
TU96328 other upstream 351495 12760817 ~ 12773439 (+) True LOC120562335
TU96107 other upstream 1415425 11708453 ~ 11709509 (+) False LOC120561922
TU96068 other upstream 1508692 11599037 ~ 11616242 (+) True G71896
TU96069 other upstream 1508692 11599037 ~ 11616242 (+) False G71896
TU95894 other upstream 2303434 10820295 ~ 10821500 (+) False G71743
TU96598 other downstream 342330 13468227 ~ 13470450 (+) False prelid3a
TU96779 other downstream 1007714 14133611 ~ 14144296 (+) False cmc1
TU96805 other downstream 1049952 14175849 ~ 14176627 (+) False LOC120562174
TU96848 other downstream 1299897 14425794 ~ 14426180 (+) True G72506
TU96917 other downstream 1500581 14626478 ~ 14630463 (+) False LOC120561718

Expression Profile