RNA id: TU96848



Basic Information


Item Value
RNA id TU96848
length 387
RNA type TUCP
GC content 0.48
exon number 1
gene id G72506
representative True

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 14425794 ~ 14426180 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gggacacttgatggaactgagccatcgttaaggttatcaatttcagctgtgcttttcctactatgacaagtcaaaaatgtctgctgttaaAAAGGTCCATAGTCAAGATGACAACGTTGGTCTCGTGGCTGACTCAACCTGTTGGATGTTGCTCTTGGCGTTTTTTGCCTGTCCTGATGTTTTTCTCTTGTGCTACAGTTTTTTGGAGCCTGACTCCGGCTGCCACTCGCTCCTGCCATCCACCATTCTGCCCGCTACTACTGGACCTCACTACCGACTGAACACTCACACCTACACGGACACTCCTGATTGGAACCCCTGGACCTGTACCCCTCTGAAAACCTGGACTTGCTTCCCCTTTCTGTTACAAGGACAATTAAGTACTGc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU96813 lncRNA upstream 55703 14368266 ~ 14370091 (+) False LOC120562174
TU96799 lncRNA upstream 262050 14163536 ~ 14163744 (+) True G72466
XR_005639660.1 lncRNA upstream 337998 14086603 ~ 14087796 (+) True LOC120561831
TU96714 lncRNA upstream 379745 14041888 ~ 14046049 (+) False LOC120561928
TU96663 lncRNA upstream 737309 13687589 ~ 13688485 (+) False LOC120562711
TU96863 lncRNA downstream 88487 14514667 ~ 14517897 (+) True G72520
TU96909 lncRNA downstream 177804 14603984 ~ 14604638 (+) True G72551
TU96919 lncRNA downstream 206900 14633080 ~ 14633375 (+) True G72559
TU96920 lncRNA downstream 207997 14634177 ~ 14635023 (+) True G72560
TU96921 lncRNA downstream 211690 14637870 ~ 14640768 (+) True G72561
XM_039805723.1 mRNA upstream 57375 14237940 ~ 14368419 (+) True LOC120562174
XM_039805720.1 mRNA upstream 58533 14175817 ~ 14367261 (+) False LOC120562174
XM_039805721.1 mRNA upstream 58533 14175817 ~ 14367261 (+) False LOC120562174
XM_039805722.1 mRNA upstream 58533 14175817 ~ 14367261 (+) False LOC120562174
XM_039805719.1 mRNA upstream 58533 14237941 ~ 14367261 (+) False LOC120562174
XM_039804763.1 mRNA downstream 157855 14584035 ~ 14588452 (+) False LOC120561614
XM_039804762.1 mRNA downstream 158633 14584813 ~ 14588452 (+) True LOC120561614
XM_039804764.1 mRNA downstream 158633 14584813 ~ 14588452 (+) False LOC120561614
XM_039804910.1 mRNA downstream 164063 14590243 ~ 14593984 (+) True si:cabz01093077.1
XM_039804909.1 mRNA downstream 164063 14590243 ~ 14593984 (+) False si:cabz01093077.1
TU96805 other upstream 249167 14175849 ~ 14176627 (+) False LOC120562174
TU96779 other upstream 281498 14133611 ~ 14144296 (+) False cmc1
TU96598 other upstream 955344 13468227 ~ 13470450 (+) False prelid3a
TU96452 other upstream 1299897 13124934 ~ 13125897 (+) True G72204
TU96328 other upstream 1652355 12760817 ~ 12773439 (+) True LOC120562335
TU96917 other downstream 200298 14626478 ~ 14630463 (+) False LOC120561718
unassigned_transcript_349 other downstream 600402 15026582 ~ 15026653 (+) True trnae-cuc_16
TU97064 other downstream 1127284 15553464 ~ 15555952 (+) False irx4a
TU97163 other downstream 1592179 16018359 ~ 16072201 (+) True G72750
unassigned_transcript_351 other downstream 2942523 17368703 ~ 17368775 (+) True trnar-acg_16

Expression Profile