Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU97154 |
| length | 840 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 3 |
| gene id | LOC120562129 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 15969177 ~ 16009134 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU97106 | lncRNA | upstream | 121871 | 15844310 ~ 15847320 (+) | True | G72705 |
| TU97104 | lncRNA | upstream | 121871 | 15845161 ~ 15847320 (+) | False | G72705 |
| TU97101 | lncRNA | upstream | 124253 | 15836962 ~ 15844938 (+) | True | G72704 |
| TU97071 | lncRNA | upstream | 379033 | 15589897 ~ 15590158 (+) | True | G72680 |
| XR_005639889.1 | lncRNA | upstream | 805967 | 15100974 ~ 15163224 (+) | False | LOC120562980 |
| TU97202 | lncRNA | downstream | 165960 | 16175094 ~ 16181930 (+) | False | G72775 |
| TU97200 | lncRNA | downstream | 169378 | 16178512 ~ 16181930 (+) | True | G72775 |
| TU97226 | lncRNA | downstream | 471545 | 16480679 ~ 16481932 (+) | True | G72795 |
| TU97227 | lncRNA | downstream | 473121 | 16482255 ~ 16482498 (+) | True | G72796 |
| TU97228 | lncRNA | downstream | 476579 | 16485713 ~ 16485919 (+) | True | G72797 |
| XM_039807219.1 | mRNA | upstream | 261689 | 15682419 ~ 15707502 (+) | True | LOC120563110 |
| XM_039807297.1 | mRNA | upstream | 293969 | 15657241 ~ 15675222 (+) | True | slc6a3 |
| XM_039806257.1 | mRNA | upstream | 316139 | 15619516 ~ 15653052 (+) | True | LOC120562533 |
| XM_039804827.1 | mRNA | upstream | 408899 | 15553541 ~ 15560292 (+) | True | irx4a |
| XM_039806960.1 | mRNA | upstream | 555144 | 15408178 ~ 15414047 (+) | True | irx2a |
| XM_039805971.1 | mRNA | downstream | 486592 | 16495726 ~ 16508741 (+) | True | mboat1 |
| XM_039806537.1 | mRNA | downstream | 623742 | 16632876 ~ 16718524 (+) | False | LOC120562688 |
| XM_039806538.1 | mRNA | downstream | 623745 | 16632879 ~ 16718524 (+) | True | LOC120562688 |
| XM_039806536.1 | mRNA | downstream | 689245 | 16698379 ~ 16718524 (+) | False | LOC120562688 |
| XM_039806539.1 | mRNA | downstream | 712502 | 16721636 ~ 16724556 (+) | True | LOC120562690 |
| TU97064 | other | upstream | 413239 | 15553464 ~ 15555952 (+) | False | irx4a |
| unassigned_transcript_349 | other | upstream | 942538 | 15026582 ~ 15026653 (+) | True | trnae-cuc_16 |
| TU96917 | other | upstream | 1338728 | 14626478 ~ 14630463 (+) | False | LOC120561718 |
| TU96848 | other | upstream | 1543011 | 14425794 ~ 14426180 (+) | True | G72506 |
| TU96805 | other | upstream | 1792564 | 14175849 ~ 14176627 (+) | False | LOC120562174 |
| TU97163 | other | downstream | 9225 | 16018359 ~ 16072201 (+) | True | G72750 |
| unassigned_transcript_351 | other | downstream | 1359569 | 17368703 ~ 17368775 (+) | True | trnar-acg_16 |
| TU97574 | other | downstream | 1440451 | 17449585 ~ 17452568 (+) | True | G73031 |
| XR_005639656.1 | other | downstream | 1447509 | 17456643 ~ 17460327 (+) | False | ubxn11 |
| TU97725 | other | downstream | 1636379 | 17645513 ~ 17647186 (+) | True | G73123 |
