RNA id: TU97862



Basic Information


Item Value
RNA id TU97862
length 201
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G73232
representative True

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 18129019 ~ 18129219 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTAAATTACTATCTGCTGCTTGATGTTCCGTCTGCTGGGCATCACCGGGTGGTCCCGTTGTTAAATCCCCACTGTTGGTCTGAACAGCTCCCAGTAGaacctccctctcctcctcctttactGGGTAGAAGATACACTGGTTGGTGTTGAACTCCGGGGTGACGCAACCTTCCTTCCTTGTTGGCTCCCCACTCTCCATTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU97861 lncRNA upstream 1132 18127423 ~ 18127887 (+) True G73231
TU97857 lncRNA upstream 1701 18124994 ~ 18127318 (+) True G73230
TU97860 lncRNA upstream 1701 18125080 ~ 18127318 (+) False G73230
TU97858 lncRNA upstream 2065 18124994 ~ 18126954 (+) False G73230
TU97859 lncRNA upstream 2065 18125080 ~ 18126954 (+) False G73230
TU97863 lncRNA downstream 833 18130052 ~ 18130318 (+) True G73233
TU97894 lncRNA downstream 73538 18202757 ~ 18211423 (+) True G73254
TU97952 lncRNA downstream 201448 18330667 ~ 18330913 (+) True G73307
TU97956 lncRNA downstream 262120 18391339 ~ 18395195 (+) True G73311
TU97975 lncRNA downstream 294770 18423989 ~ 18424403 (+) True G73326
XM_039806002.1 mRNA upstream 23270 18092303 ~ 18105749 (+) True si:dkey-34d22.1
XM_039806003.1 mRNA upstream 23270 18092304 ~ 18105749 (+) False si:dkey-34d22.1
XM_039804754.1 mRNA upstream 373964 17750930 ~ 17755055 (+) True paqr7b
XM_039804753.1 mRNA upstream 381993 17741886 ~ 17747026 (+) True stmn1b
XM_039804751.1 mRNA upstream 387639 17739832 ~ 17741380 (+) True LOC120561605
XM_039806700.1 mRNA downstream 41610 18170829 ~ 18172243 (+) True LOC120562800
XM_039806696.1 mRNA downstream 180853 18310072 ~ 18311498 (+) True LOC120562798
XM_039805443.1 mRNA downstream 185450 18314669 ~ 18318666 (+) True has1
XM_039806719.1 mRNA downstream 258126 18387345 ~ 18388459 (+) True LOC120562815
XM_039806718.1 mRNA downstream 266188 18395407 ~ 18397717 (+) True si:dkey-79d12.5
TU97779 other upstream 349889 17750956 ~ 17779130 (+) False paqr7b
TU97725 other upstream 481833 17645513 ~ 17647186 (+) True G73123
XR_005639656.1 other upstream 668692 17456643 ~ 17460327 (+) False ubxn11
TU97574 other upstream 676451 17449585 ~ 17452568 (+) True G73031
unassigned_transcript_351 other upstream 760244 17368703 ~ 17368775 (+) True trnar-acg_16
XR_005639678.1 other downstream 269837 18399056 ~ 18418232 (+) True kcnn4
XR_005639679.1 other downstream 269837 18399056 ~ 18416988 (+) False kcnn4
TU97972 other downstream 285879 18415098 ~ 18420327 (+) False kcnn4
XR_005639844.1 other downstream 503183 18632402 ~ 18637307 (+) True LOC120562796
XR_005639845.1 other downstream 503187 18632406 ~ 18637307 (+) False LOC120562796

Expression Profile