RNA id: TU99110


Basic Information

Item Value
RNA id TU99110
length 204
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G74116
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 20476164 ~ 20476367 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTTGACTCATCAGTGGTGACAGATTCTTCTTTGAAGTGTACCTTTTATGGGAGTTCAGAAGCTCACAAAAGTTAAAGTGATGCATCAACCTAAAATCATCAGAAATGCAAAGCTATACGATCAAATGGGATGACTAAGAAGACACCTTTCAATGGAAGCAACCGATGGATTCAGTTTTTAGTGCACTCTAATCTTGCGAGGCCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99077 lncRNA upstream 52267 20402823 ~ 20423897 (+) True G74091
TU99064 lncRNA upstream 135237 20340341 ~ 20340927 (+) True G74081
TU99041 lncRNA upstream 150256 20322330 ~ 20325908 (+) False gra
TU99044 lncRNA upstream 158047 20314484 ~ 20318117 (+) True G74067
TU98940 lncRNA upstream 258825 20216207 ~ 20217339 (+) False si:ch211-257p13.3
TU99113 lncRNA downstream 8343 20484710 ~ 20484943 (+) True G74119
TU99115 lncRNA downstream 32366 20508733 ~ 20520082 (+) True G74121
TU99159 lncRNA downstream 123970 20600337 ~ 20605105 (+) False glipr2l
TU99160 lncRNA downstream 130973 20607340 ~ 20614707 (+) True G74145
TU99240 lncRNA downstream 355956 20832323 ~ 20836748 (+) True G74204
XM_039805895.1 mRNA upstream 610 20448227 ~ 20475554 (+) True si:dkey-12j5.1
XM_039805896.1 mRNA upstream 610 20448227 ~ 20475554 (+) False si:dkey-12j5.1
XM_039806791.1 mRNA upstream 96081 20368104 ~ 20380083 (+) True LOC120562868
XM_039806792.1 mRNA upstream 117967 20352377 ~ 20358197 (+) True LOC120562869
XM_039806793.1 mRNA upstream 123923 20350979 ~ 20352241 (+) True fabp4b
XM_039806762.1 mRNA downstream 123956 20600323 ~ 20605165 (+) True glipr2l
XM_039805369.1 mRNA downstream 155091 20631458 ~ 20641851 (+) True LOC120561989
XM_039805826.1 mRNA downstream 427486 20903853 ~ 20960657 (+) True galnt1
XM_039805825.1 mRNA downstream 427487 20903854 ~ 20960657 (+) False galnt1
XM_039805828.1 mRNA downstream 427487 20903854 ~ 20960657 (+) False galnt1
TU98645 other upstream 826653 19646975 ~ 19649511 (+) True G73779
TU98340 other upstream 1317169 19148613 ~ 19158995 (+) False G73570
TU98343 other upstream 1317169 19148613 ~ 19158995 (+) True G73570
TU98057 other upstream 1729489 18744662 ~ 18746675 (+) True LOC120562824
TU98024 other upstream 1822527 18652411 ~ 18653637 (+) False LOC120562819
TU99269 other downstream 531666 21008033 ~ 21011371 (+) False sec61b
TU99513 other downstream 926760 21403127 ~ 21404603 (+) False crot
TU99582 other downstream 1122688 21599055 ~ 21603230 (+) True them4
TU99801 other downstream 1293181 21769548 ~ 21770286 (+) True G74633
TU99947 other downstream 1656211 22132578 ~ 22136234 (+) True LOC120561539

Expression Profile