RNA id: TU99115


Basic Information

Item Value
RNA id TU99115
length 219
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G74121
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 20508733 ~ 20520082 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gcaggtctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacagacacacacagacacacacacacacacacacccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaaagc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99113 lncRNA upstream 23790 20484710 ~ 20484943 (+) True G74119
TU99110 lncRNA upstream 32366 20476164 ~ 20476367 (+) True G74116
TU99077 lncRNA upstream 84836 20402823 ~ 20423897 (+) True G74091
TU99064 lncRNA upstream 167806 20340341 ~ 20340927 (+) True G74081
TU99041 lncRNA upstream 182825 20322330 ~ 20325908 (+) False gra
TU99159 lncRNA downstream 80255 20600337 ~ 20605105 (+) False glipr2l
TU99160 lncRNA downstream 87258 20607340 ~ 20614707 (+) True G74145
TU99240 lncRNA downstream 312241 20832323 ~ 20836748 (+) True G74204
TU99241 lncRNA downstream 320478 20840560 ~ 20841769 (+) True G74205
TU99244 lncRNA downstream 371602 20891684 ~ 20892655 (+) True G74208
XM_039805895.1 mRNA upstream 33179 20448227 ~ 20475554 (+) True si:dkey-12j5.1
XM_039805896.1 mRNA upstream 33179 20448227 ~ 20475554 (+) False si:dkey-12j5.1
XM_039806791.1 mRNA upstream 128650 20368104 ~ 20380083 (+) True LOC120562868
XM_039806792.1 mRNA upstream 150536 20352377 ~ 20358197 (+) True LOC120562869
XM_039806793.1 mRNA upstream 156492 20350979 ~ 20352241 (+) True fabp4b
XM_039806762.1 mRNA downstream 80241 20600323 ~ 20605165 (+) True glipr2l
XM_039805369.1 mRNA downstream 111376 20631458 ~ 20641851 (+) True LOC120561989
XM_039805826.1 mRNA downstream 383771 20903853 ~ 20960657 (+) True galnt1
XM_039805825.1 mRNA downstream 383772 20903854 ~ 20960657 (+) False galnt1
XM_039805828.1 mRNA downstream 383772 20903854 ~ 20960657 (+) False galnt1
TU98645 other upstream 859222 19646975 ~ 19649511 (+) True G73779
TU98340 other upstream 1349738 19148613 ~ 19158995 (+) False G73570
TU98343 other upstream 1349738 19148613 ~ 19158995 (+) True G73570
TU98057 other upstream 1762058 18744662 ~ 18746675 (+) True LOC120562824
TU98024 other upstream 1855096 18652411 ~ 18653637 (+) False LOC120562819
TU99269 other downstream 487951 21008033 ~ 21011371 (+) False sec61b
TU99513 other downstream 883045 21403127 ~ 21404603 (+) False crot
TU99582 other downstream 1078973 21599055 ~ 21603230 (+) True them4
TU99801 other downstream 1249466 21769548 ~ 21770286 (+) True G74633
TU99947 other downstream 1612496 22132578 ~ 22136234 (+) True LOC120561539

Expression Profile