RNA id: TU99159


Basic Information

Item Value
RNA id TU99159
length 1280
lncRNA type sense_over
GC content 0.44
exon number 4
gene id glipr2l
representative False

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 20600323 ~ 20605165 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTAAAGACAAGGAGTGGGTGTGTACTCTGCAGGTTTAGTTAAATGAAGTGAAACAGAACTTGAGGAAGAAGCATGTTACGAAAGGATCTTTAAAACCAGATACACAGCTAAAGGGGAagtttgctgctgttttttcaAGGTGGAATGAGACAGCAATTGAAGGAAAGGCCCCCGAAATAACGGCATTGGCAGCTGTTTCAAAGCATCAACATTAGATAGACAGCagtaaaggaagaaagagagggggagcaagcaacagagaaaaagagaggaggagcaaAAAACAAGACAGGGGAGAGGCTGCTTTCGTTCAGTGCTAAGAGTGTTTCTGATCTTACTGAAGGCTTCCTGTGTCAGCACCATGGGGAAGTCAGTTATGCTGAAAGTCTGGCCAGCACACGGATCCTGAAACACAGCGTGGAGTCCAGTAGAGGGAGCTGTGGAGAGAACCTGGCGTGGGCCTCCTATGACCAATCAGGAAAGGATGTTACAGACCGCTGGTATGATGAAGTGAAACAGTACAACTTCAACCGTCCTGGATTCTCCTCTGGCACTGGTCATTTCACGGCAATGGTGTGGAAGAGCAGTAATAAGTTGGGTGTCGGTAAGGCTACTGCATCAGACGGTTCATCCTTTGTGGTGGCCAGATACTTCCCCGCTGGAAATATCACTAACCAGGGACACTTTGAAAACAACGTCCTCCCAGCTAAATCCACCACCTAACGATGTCTCGATCCCCAACACTTGACTCAAGCCCAAAGGCATTTATTCCATTTTCCAGGAGAGTCTGAAGTTGTCTGCCTGCACTGAAGGATGAAGGATACTCAGGAGAGCAGCACATCTCGCCTAGTAGAGATCCATACTATcttgtatagattttttttttatgaaatgcaCTCAGGCTTCCAGTCCTGTTTGTCATTTGAAAAAAGACCTGTGTTTGATACAGTGTTTAGAATGAAGAAATCACTACTGTCTGACATTGCTAACAAAACATTTCCAGTAACCATTTGGATTGTTTAATCTTGATTTTGATGGTCATTTACATTGCCTCTGACAGTATTTCATTCATTaatgtcaatgtttttttatttttacacgctGAAATACATCATCGCCTCACATCCGTATTTGAGTAAAAATGAGAATTAAGTTATTCAAAGGGACAGGCTTTATGAATTTACACTTGGAGTCATTGCTTGTAATTCAAAGCTATTGACTCAGCATGCGTGGTATGTGTTGTTGCGACTACTTGTCAAAGCCAACCCTGCAGTCCCCGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99115 lncRNA upstream 80255 20508733 ~ 20520082 (+) True G74121
TU99113 lncRNA upstream 115394 20484710 ~ 20484943 (+) True G74119
TU99110 lncRNA upstream 123970 20476164 ~ 20476367 (+) True G74116
TU99077 lncRNA upstream 176440 20402823 ~ 20423897 (+) True G74091
TU99064 lncRNA upstream 259410 20340341 ~ 20340927 (+) True G74081
TU99160 lncRNA downstream 2235 20607340 ~ 20614707 (+) True G74145
TU99240 lncRNA downstream 227218 20832323 ~ 20836748 (+) True G74204
TU99241 lncRNA downstream 235455 20840560 ~ 20841769 (+) True G74205
TU99244 lncRNA downstream 286579 20891684 ~ 20892655 (+) True G74208
TU99243 lncRNA downstream 288034 20893139 ~ 20893942 (+) True G74207
XM_039805895.1 mRNA upstream 124783 20448227 ~ 20475554 (+) True si:dkey-12j5.1
XM_039805896.1 mRNA upstream 124783 20448227 ~ 20475554 (+) False si:dkey-12j5.1
XM_039806791.1 mRNA upstream 220254 20368104 ~ 20380083 (+) True LOC120562868
XM_039806792.1 mRNA upstream 242140 20352377 ~ 20358197 (+) True LOC120562869
XM_039806793.1 mRNA upstream 248096 20350979 ~ 20352241 (+) True fabp4b
XM_039805369.1 mRNA downstream 26353 20631458 ~ 20641851 (+) True LOC120561989
XM_039805826.1 mRNA downstream 298748 20903853 ~ 20960657 (+) True galnt1
XM_039805825.1 mRNA downstream 298749 20903854 ~ 20960657 (+) False galnt1
XM_039805828.1 mRNA downstream 298749 20903854 ~ 20960657 (+) False galnt1
XM_039805829.1 mRNA downstream 298752 20903857 ~ 20960657 (+) False galnt1
TU98645 other upstream 950826 19646975 ~ 19649511 (+) True G73779
TU98340 other upstream 1441342 19148613 ~ 19158995 (+) False G73570
TU98343 other upstream 1441342 19148613 ~ 19158995 (+) True G73570
TU98057 other upstream 1853662 18744662 ~ 18746675 (+) True LOC120562824
TU98024 other upstream 1946700 18652411 ~ 18653637 (+) False LOC120562819
TU99269 other downstream 402928 21008033 ~ 21011371 (+) False sec61b
TU99513 other downstream 798022 21403127 ~ 21404603 (+) False crot
TU99582 other downstream 993950 21599055 ~ 21603230 (+) True them4
TU99801 other downstream 1164443 21769548 ~ 21770286 (+) True G74633
TU99947 other downstream 1527473 22132578 ~ 22136234 (+) True LOC120561539

Expression Profile