Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU99947 |
| length | 871 |
| RNA type | TUCP |
| GC content | 0.37 |
| exon number | 3 |
| gene id | LOC120561539 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 22132578 ~ 22136234 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0030162 | regulation of proteolysis | biological_process |
| GO:0051246 | regulation of protein metabolic process | biological_process |
| GO:0052547 | regulation of peptidase activity | biological_process |
| GO:0051336 | regulation of hydrolase activity | biological_process |
| id | description |
|---|---|
| ko05170 | Human immunodeficiency virus 1 infection |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU99945 | lncRNA | upstream | 2664 | 22129652 ~ 22129914 (+) | True | G74737 |
| TU99938 | lncRNA | upstream | 11232 | 22119738 ~ 22121346 (+) | True | G74732 |
| TU99939 | lncRNA | upstream | 11717 | 22119738 ~ 22120861 (+) | False | G74732 |
| TU99933 | lncRNA | upstream | 16552 | 22115616 ~ 22116026 (+) | True | G74729 |
| TU99858 | lncRNA | upstream | 40662 | 22090620 ~ 22091916 (+) | False | slc50a1 |
| TU99948 | lncRNA | downstream | 17369 | 22153603 ~ 22154684 (+) | False | snx27b |
| TU99977 | lncRNA | downstream | 47549 | 22183783 ~ 22184037 (+) | True | G74760 |
| TU99983 | lncRNA | downstream | 106583 | 22242817 ~ 22243033 (+) | True | G74764 |
| TU99984 | lncRNA | downstream | 109255 | 22245489 ~ 22245763 (+) | True | G74765 |
| TU99992 | lncRNA | downstream | 119037 | 22255271 ~ 22255478 (+) | True | G74769 |
| XM_039804670.1 | mRNA | upstream | 8141 | 22121704 ~ 22124437 (+) | True | s100w |
| XM_039804669.1 | mRNA | upstream | 8141 | 22123245 ~ 22124437 (+) | False | s100w |
| XM_039805520.1 | mRNA | upstream | 17018 | 22114119 ~ 22115560 (+) | True | s100a10b |
| XM_039805518.1 | mRNA | upstream | 19516 | 22110516 ~ 22113062 (+) | True | krtcap2 |
| XM_039805519.1 | mRNA | upstream | 19516 | 22110525 ~ 22113062 (+) | False | krtcap2 |
| XM_039804664.1 | mRNA | downstream | 1313 | 22137547 ~ 22139223 (+) | True | LOC120561537 |
| XM_039806904.1 | mRNA | downstream | 3546 | 22139780 ~ 22153933 (+) | True | snx27b |
| XM_039806903.1 | mRNA | downstream | 3894 | 22140128 ~ 22153933 (+) | False | snx27b |
| XM_039805203.1 | mRNA | downstream | 31231 | 22167465 ~ 22183428 (+) | False | adar |
| XM_039805204.1 | mRNA | downstream | 32720 | 22168954 ~ 22183428 (+) | True | adar |
| TU99801 | other | upstream | 362292 | 21769548 ~ 21770286 (+) | True | G74633 |
| TU99582 | other | upstream | 529348 | 21599055 ~ 21603230 (+) | True | them4 |
| TU99513 | other | upstream | 727975 | 21403127 ~ 21404603 (+) | False | crot |
| TU99269 | other | upstream | 1121207 | 21008033 ~ 21011371 (+) | False | sec61b |
| TU98645 | other | upstream | 2483067 | 19646975 ~ 19649511 (+) | True | G73779 |
| TU99946 | other | downstream | 1331 | 22137565 ~ 22139223 (+) | False | LOC120561537 |
| TU99979 | other | downstream | 61560 | 22197794 ~ 22199818 (+) | False | kcnn3 |
| TU100002 | other | downstream | 149070 | 22285304 ~ 22288294 (+) | False | fam189b |
| XR_005639675.1 | other | downstream | 160614 | 22296848 ~ 22306152 (+) | False | rusc1 |
| XR_005639857.1 | other | downstream | 333744 | 22469978 ~ 22489944 (+) | False | rprd2b |
