Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039804862.1 |
| length | 1416 |
| RNA type | mRNA |
| GC content | 0.66 |
| exon number | 2 |
| gene id | onecutl |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 33087190 ~ 33096138 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU104154 | lncRNA | upstream | 34331 | 33051480 ~ 33052859 (+) | True | G77897 |
| TU104139 | lncRNA | upstream | 36690 | 33017521 ~ 33050500 (+) | True | G77887 |
| TU104142 | lncRNA | upstream | 57399 | 33022098 ~ 33029791 (+) | False | G77890 |
| TU104143 | lncRNA | upstream | 58519 | 33022098 ~ 33028671 (+) | True | G77890 |
| TU104133 | lncRNA | upstream | 107289 | 32928334 ~ 32979901 (+) | True | G77883 |
| TU104152 | lncRNA | downstream | 1490 | 33097628 ~ 33099548 (+) | True | G77895 |
| TU104157 | lncRNA | downstream | 5765 | 33101903 ~ 33105633 (+) | False | G77899 |
| TU104158 | lncRNA | downstream | 8305 | 33104443 ~ 33105633 (+) | False | G77899 |
| TU104159 | lncRNA | downstream | 8305 | 33104443 ~ 33105633 (+) | True | G77899 |
| TU104160 | lncRNA | downstream | 10071 | 33106209 ~ 33106571 (+) | True | G77900 |
| XM_039805115.1 | mRNA | upstream | 38053 | 33032239 ~ 33049137 (+) | True | hormad1 |
| XM_039805114.1 | mRNA | upstream | 38053 | 33033735 ~ 33049137 (+) | False | hormad1 |
| XM_039806159.1 | mRNA | upstream | 136480 | 32947311 ~ 32950710 (+) | True | LOC120562446 |
| XM_039805771.1 | mRNA | upstream | 175998 | 32905361 ~ 32911192 (+) | True | scnm1 |
| XM_039805772.1 | mRNA | upstream | 175998 | 32905395 ~ 32911192 (+) | False | scnm1 |
| XM_039807226.1 | mRNA | downstream | 79771 | 33175909 ~ 33200642 (+) | True | lingo4b |
| XM_039807225.1 | mRNA | downstream | 100077 | 33196215 ~ 33200642 (+) | False | lingo4b |
| XM_039806850.1 | mRNA | downstream | 110569 | 33206707 ~ 33260917 (+) | True | si:ch211-113g11.6 |
| XM_039804734.1 | mRNA | downstream | 167592 | 33263730 ~ 33278517 (+) | True | tlr18 |
| XM_039804735.1 | mRNA | downstream | 174298 | 33270436 ~ 33278517 (+) | False | tlr18 |
| XR_005639638.1 | other | upstream | 665718 | 32405133 ~ 32421472 (+) | True | LOC120561717 |
| XR_005639639.1 | other | upstream | 665718 | 32405133 ~ 32421472 (+) | False | LOC120561717 |
| TU103881 | other | upstream | 1107281 | 31976318 ~ 31979909 (+) | True | G77682 |
| TU103600 | other | upstream | 1951044 | 31134829 ~ 31136146 (+) | True | G77447 |
| TU103301 | other | upstream | 2962552 | 30123702 ~ 30124638 (+) | True | G77239 |
| TU104140 | other | downstream | 4275 | 33100413 ~ 33101534 (+) | True | G77888 |
| unassigned_transcript_355 | other | downstream | 529793 | 33625931 ~ 33626002 (+) | True | trnap-agg_3 |
| unassigned_transcript_356 | other | downstream | 534901 | 33631039 ~ 33631110 (+) | True | trnap-agg_4 |
| unassigned_transcript_357 | other | downstream | 535504 | 33631642 ~ 33631713 (+) | True | trnap-agg_5 |
| TU104301 | other | downstream | 742938 | 33839076 ~ 33861112 (+) | False | bmper |
