Item | Value |
---|---|
RNA id | XM_039804950.1 |
length | 5436 |
RNA type | mRNA |
GC content | 0.48 |
exon number | 22 |
gene id | LOC120561733 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_053118.1 |
NCBI id | CM020915.1 |
chromosome length | 43092710 |
location | 34419907 ~ 34441093 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
id | name | namespace |
---|---|---|
GO:0006935 | chemotaxis | biological_process |
GO:0042330 | taxis | biological_process |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU104500 | lncRNA | upstream | 74514 | 34342514 ~ 34345393 (+) | True | LOC120561758 |
XR_005639641.1 | lncRNA | upstream | 74677 | 34342526 ~ 34345230 (+) | False | LOC120561758 |
TU104490 | lncRNA | upstream | 95548 | 34316811 ~ 34324359 (+) | True | G78180 |
TU104487 | lncRNA | upstream | 96893 | 34316811 ~ 34323014 (+) | False | G78180 |
TU104495 | lncRNA | upstream | 96893 | 34316811 ~ 34323014 (+) | False | G78180 |
TU104533 | lncRNA | downstream | 27813 | 34468906 ~ 34469457 (+) | False | G78195 |
TU104534 | lncRNA | downstream | 27813 | 34468906 ~ 34469457 (+) | True | G78195 |
XR_005639650.1 | lncRNA | downstream | 61780 | 34502873 ~ 34505357 (+) | True | LOC120561766 |
TU104541 | lncRNA | downstream | 88262 | 34529355 ~ 34544379 (+) | True | G78200 |
TU104566 | lncRNA | downstream | 193662 | 34634755 ~ 34658151 (+) | True | G78219 |
XM_039806542.1 | mRNA | upstream | 331161 | 34084095 ~ 34088746 (+) | True | LOC120562692 |
XM_039806163.1 | mRNA | upstream | 377259 | 33990542 ~ 34042648 (+) | True | sh3bp5b |
XM_039806470.1 | mRNA | upstream | 483964 | 33922578 ~ 33935943 (+) | True | LOC120562646 |
XM_039806471.1 | mRNA | upstream | 483964 | 33922583 ~ 33935943 (+) | False | LOC120562646 |
XM_039806468.1 | mRNA | upstream | 500732 | 33916999 ~ 33919175 (+) | True | LOC120562644 |
XM_039804954.1 | mRNA | downstream | 168817 | 34609910 ~ 34622583 (+) | True | nes |
XM_039807294.1 | mRNA | downstream | 510959 | 34952052 ~ 34964798 (+) | False | hapln2 |
XM_039807292.1 | mRNA | downstream | 510959 | 34952052 ~ 34964134 (+) | True | hapln2 |
XM_039807293.1 | mRNA | downstream | 510959 | 34952052 ~ 34963856 (+) | False | hapln2 |
XM_039807365.1 | mRNA | downstream | 602128 | 35043221 ~ 35058363 (+) | True | rrnad1 |
TU104420 | other | upstream | 383940 | 33990595 ~ 34035967 (+) | False | sh3bp5b |
TU104327 | other | upstream | 515644 | 33894372 ~ 33904263 (+) | False | LOC120562157 |
TU104301 | other | upstream | 558795 | 33839076 ~ 33861112 (+) | False | bmper |
unassigned_transcript_357 | other | upstream | 788194 | 33631642 ~ 33631713 (+) | True | trnap-agg_5 |
unassigned_transcript_356 | other | upstream | 788797 | 33631039 ~ 33631110 (+) | True | trnap-agg_4 |
TU104540 | other | downstream | 88262 | 34529355 ~ 34544379 (+) | False | G78200 |
TU104752 | other | downstream | 398064 | 34839157 ~ 34856532 (+) | False | LOC120562567 |
unassigned_transcript_361 | other | downstream | 747025 | 35188118 ~ 35188199 (+) | True | trnas-aga_7 |
TU105077 | other | downstream | 964282 | 35405375 ~ 35408682 (+) | True | G78594 |
TU105193 | other | downstream | 1424749 | 35865842 ~ 35888172 (+) | False | LOC120562279 |