RNA id: XM_039804996.1



Basic Information


Item Value
RNA id XM_039804996.1
length 1014
RNA type mRNA
GC content 0.47
exon number 3
gene id mrpl32
representative True

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 12544496 ~ 12546473 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TGTCGCTGTTTGATGACGTAGCAAACGCCAGTGACCGTGAGCTGTTTGCTGACATGTTTGACGGGAAAGAAGCGTGCTGACAACCAAAATGATGAATTTAGCCGCTTTAGTGCACAGCCTCAGATGCTCTTTGCTACACATTGAAAGCAGACTTCTGCAGGCGGCCGGACTAGACAGACAACTGGCTCCAGCGCTGGCAGTGAGTGGCCCCAGCCTTCTGCCTCAGCTCTCCGGGGAGGAGGAACGTGGTGAGGAGCAGCAGGGCCCGGAGCAGCCTCCCGGCGTCCTCGACGGCATCCTGTGGATGGCAGCACCGAAGAAGAGACGTACTATAGAGATCAACCGCACCAGGAGGAGAGCTGACAGCAAACTCCTAAAAGTCCAGcccaACATCGAGCCTTGTCCAGAGTGTGGCCACTTGAAGCAGAAACATATCATGTGTGGCTTCTGTTACGCAAAGGTTTGCAGGGAGACGGCTTTGATTCGTCAACAGATAAAAGCTATGGAAGGCGGCCCCCTGAAGGCCCCGACTGTGGAGACTGTCATCCTGTACGAGGGTGAAACACCAAGTCAGCAGGACAAGGACAAGAGGATTGTGGAGAGACCAAGGAAGAGGCCTGCCTGGTTCAGCTACTGAAGCTGAGATATTAATACTGTGTGTGATACAtaccttgagtttgacacaggTCTGGTCAGACACTGATTCTTTATATTATGTAGTAAACAGCATATTTTATCCAGTCTGTTATTCAGTAAATGGGGAGGCTTATTTATCAGTTTTGCTTCCACAAACAACTAACATAAAGGGATTGTTTGATCAGCACTGATACCAGGAACCGTGATAATTACGTTATGTCTGTGAACATACTCTGGTATATATCATCGATGCGAGGCACATCAAGGTATCAGAcagcttttttttgtcattggtTCAACTGTTTGTCATATTTTCGACTGAGATAaatttactgtatgtttgaATAATAAATTcattatttgaaaaaaagaatctta

Function


GO:

id name namespace
GO:0006412 translation biological_process
GO:0015934 large ribosomal subunit cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02911 RP-L32, MRPL32, rpmF; large subunit ribosomal protein L32

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU96221 lncRNA upstream 3945 12537310 ~ 12540551 (+) True G72018
TU96209 lncRNA upstream 24491 12518663 ~ 12520005 (+) True G72006
TU96186 lncRNA upstream 56631 12487637 ~ 12487865 (+) True G71989
TU96184 lncRNA upstream 57739 12486475 ~ 12486757 (+) True G71987
XR_005639635.1 lncRNA upstream 172667 12370724 ~ 12371829 (+) True LOC120561687
TU96237 lncRNA downstream 48111 12594584 ~ 12596659 (+) True G72028
TU96245 lncRNA downstream 92841 12639314 ~ 12639789 (+) True G72036
TU96322 lncRNA downstream 172088 12718561 ~ 12729153 (+) False LOC120563165
XR_005639745.1 lncRNA downstream 214580 12761053 ~ 12770584 (+) False LOC120562335
TU96341 lncRNA downstream 231757 12778230 ~ 12778442 (+) True G72117
XM_039805266.1 mRNA upstream 59584 12478898 ~ 12484912 (+) True LOC120561925
XM_039806899.1 mRNA upstream 67932 12465949 ~ 12476564 (+) True tbc1d31
XM_039806900.1 mRNA upstream 67932 12465949 ~ 12476564 (+) False tbc1d31
XM_039806901.1 mRNA upstream 70370 12465949 ~ 12474126 (+) False tbc1d31
XM_039805296.1 mRNA upstream 88580 12427541 ~ 12455916 (+) False LOC120561949
XM_039804997.1 mRNA downstream 1547 12548020 ~ 12549958 (+) True zmp:0000000930
XM_039804999.1 mRNA downstream 9469 12555942 ~ 12567664 (+) False sdha
XM_039804998.1 mRNA downstream 9469 12555942 ~ 12564798 (+) True sdha
XM_039804714.1 mRNA downstream 95466 12641939 ~ 12649833 (+) True LOC120561578
XM_039804718.1 mRNA downstream 113043 12659516 ~ 12676990 (+) True hpn
TU96107 other upstream 834987 11708453 ~ 11709509 (+) False LOC120561922
TU96068 other upstream 928254 11599037 ~ 11616242 (+) True G71896
TU96069 other upstream 928254 11599037 ~ 11616242 (+) False G71896
TU95894 other upstream 1722996 10820295 ~ 10821500 (+) False G71743
TU95893 other upstream 1723079 10820295 ~ 10821417 (+) True G71743
TU96328 other downstream 214344 12760817 ~ 12773439 (+) True LOC120562335
TU96452 other downstream 578461 13124934 ~ 13125897 (+) True G72204
TU96598 other downstream 921754 13468227 ~ 13470450 (+) False prelid3a
TU96779 other downstream 1587138 14133611 ~ 14144296 (+) False cmc1
TU96805 other downstream 1629376 14175849 ~ 14176627 (+) False LOC120562174

Expression Profile