RNA id: XM_039805254.1


Basic Information

Item Value
RNA id XM_039805254.1
length 1553
RNA type mRNA
GC content 0.40
exon number 8
gene id ing4
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 23757600 ~ 23762818 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCTGGAAATCAGTTTTGTCAAGAATGTGgaaacaaccaatcagatttTTCCATTTCGGACCGGAAGCTGTGTTGTTTACATTTTCTAAGATGGCGGCGGGGATGTATTTGGAGCATTATTTGGACAGTATAGAAAACTTGCCCTTCGAGTTGCAGAGAAACTTCAATTTGATGAGAGATCTAGATCAACGCACAGAGGATCTAAAGGGACAGATAGACTCTCTGGCTAAAGAGTACACAGCCAACGCCAGGACTCTCTCCTCTGAACAAAAGCTGTCCATActaagacagattcagcagtcTTACAGTAAATGCAAGGAGTTTGGAGATGATAAGGTGCAACTGGCCATGCAGACCTATGAGATGGTCGACAAACACATCCGGCGTCTTGACACAGACCTGGCTCGGTTTGAGGCTGACCTGAAGGAAAAGCAGATCGAGAGCACCGACTATGATTCCACCTCTAGTAAGGGGAAGAAAGCTGAAACCAGACAGAAGGAAAAGAAGACGGCTAAAACAAGGTCTAAAGTTAAGAGTTCAGATGAAGATGGCAGTCCCAAGAGTGCACAGAAGAAAGTCAAACTCCTTCAGCCAGGAGAATTCAACAGCCCTGCCACCAACTTTGGGAATGTGCACCCATCTGATGTGCTGGACATGCCAGTGGACCCCAACGAACCCACCTACTGTCTGTGTCATCAGGTCTCTTACGGCGAGATGATCGGCTGCGACAACACTGACTGCTCTATTGAGTGGTTCCATTTTGCTTGTGTGGGCCTGACAACCAAACCAAGAGGCAAATGGTATTGCCCACGATGCTCtcaagacagaaagagaaaataaacacCTGGAACAAAAGGTGGACACTGATCAGATGGAAAATGAGAAGAATATTTCTTCATTAGTTACTAGATTTTTTGTTTCTCATCCTCCTTAACATTTGGTGCTTTTTCTTTTGGTTTATGTAATTTGCCTTGGCCTGATGCAGTGTGTGAAGGAGCCAAGTGGttacaaatgtatttaaatattttttttttttataaactgttAACgataatctttattttttttgttacctttggtgCTCTTATTGTGAtttctttgtttacattttgttttactagTGAATAATAAACACTAAAACAGCCCCCAATGGTTTAACAGTCCCAAGTTGTCACAATAATTTATACTATATTTACATGTacaactacaaaataaaaaataaaaaaagtattttctctGAAAATAGTTAGGCCATGTATACTTTTTTGCTTTGTTGTATGGTTAGTTTCTTGTGCTTACGCCTTGGAACACtagttttatgttttaagtAAAACAAGAGGGCAAAAGAACATGAAGACAAATGCTGCATCCTGACAGTATTAGTCATCTGTGGGTAGTGAGTTAAACcatttcattttaacatttgaTTGAGTGCTGTATAGAAAGTAAGACATTTTGTGAAAAGTATTGTCATTTCTGTAGCTGAAACATTGGTACAGTGGAGAGGGGGTGATTGTGTTGTCAATCATTTGAATACAGCTACTACCTCAAAAA

Function

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K11346 ING4; inhibitor of growth protein 4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU100761 lncRNA upstream 106107 23648327 ~ 23651493 (+) False casp2
XR_005639669.1 lncRNA upstream 123766 23631416 ~ 23633834 (+) True LOC120561968
TU100720 lncRNA upstream 186357 23568196 ~ 23571243 (+) False trpv6
TU100722 lncRNA upstream 187744 23568196 ~ 23569856 (+) False trpv6
TU100711 lncRNA upstream 263123 23494213 ~ 23494477 (+) True G75301
TU100857 lncRNA downstream 5422 23768240 ~ 23813408 (+) True LOC120563204
TU100883 lncRNA downstream 120359 23883177 ~ 23884631 (+) True G75427
TU100973 lncRNA downstream 180675 23943493 ~ 23948403 (+) True G75483
TU100984 lncRNA downstream 209509 23972327 ~ 23975734 (+) True G75493
TU100985 lncRNA downstream 209509 23972327 ~ 23973124 (+) False G75493
XM_039805242.1 mRNA upstream 581 23749945 ~ 23757019 (+) True nop2
XM_039805253.1 mRNA upstream 11042 23742367 ~ 23746558 (+) True LOC120561911
XM_039805243.1 mRNA upstream 15342 23736978 ~ 23742258 (+) True kel
XM_039805244.1 mRNA upstream 21169 23720129 ~ 23736431 (+) False zyx
XM_039805241.1 mRNA downstream 55 23762873 ~ 23789560 (+) True ncapd2
XM_039805257.1 mRNA downstream 28182 23791000 ~ 23793093 (+) True wu:fj39g12
XM_039805259.1 mRNA downstream 34260 23797078 ~ 23802187 (+) True gapdh
XM_039806139.1 mRNA downstream 40734 23803552 ~ 23808166 (+) True opn9
XM_039805260.1 mRNA downstream 45762 23808580 ~ 23822343 (+) True iffo1b
TU100710 other upstream 263577 23491125 ~ 23494023 (+) True LOC120562612
TU100365 other upstream 855552 22900144 ~ 22902048 (+) False cnot3a
TU100082 other upstream 937547 22814044 ~ 22820053 (+) False myh14
TU100065 other upstream 1090056 22660479 ~ 22667544 (+) False LOC120562537
TU100052 other upstream 1134516 22616972 ~ 22623084 (+) False arnt
XR_005639923.1 other downstream 1497 23764315 ~ 23764645 (+) True LOC120563205
XR_005639924.1 other downstream 4367 23767185 ~ 23767467 (+) True LOC120563206
XR_005639922.1 other downstream 5415 23768233 ~ 23768577 (+) False LOC120563204
TU100879 other downstream 111098 23873916 ~ 23879415 (+) False LOC120563047
TU101013 other downstream 268572 24031390 ~ 24032445 (+) False atn1

Expression Profile