Item | Value |
---|---|
RNA id | XM_039805517.1 |
length | 1172 |
RNA type | mRNA |
GC content | 0.41 |
exon number | 5 |
gene id | LOC120562069 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_053118.1 |
NCBI id | CM020915.1 |
chromosome length | 43092710 |
location | 22107943 ~ 22110135 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
id | description |
---|---|
K22764 | TMEM107; transmembrane protein 107 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU99858 | lncRNA | upstream | 16027 | 22090620 ~ 22091916 (+) | False | slc50a1 |
TU99814 | lncRNA | upstream | 23419 | 22083682 ~ 22084524 (+) | False | slc50a1 |
TU99850 | lncRNA | upstream | 71284 | 22036278 ~ 22036659 (+) | True | G74673 |
XR_005639855.1 | lncRNA | upstream | 382238 | 21724948 ~ 21725705 (+) | True | LOC120562851 |
TU99494 | lncRNA | upstream | 772250 | 21334669 ~ 21335693 (+) | False | LOC120563169 |
TU99933 | lncRNA | downstream | 5481 | 22115616 ~ 22116026 (+) | True | G74729 |
TU99938 | lncRNA | downstream | 9603 | 22119738 ~ 22121346 (+) | True | G74732 |
TU99939 | lncRNA | downstream | 9603 | 22119738 ~ 22120861 (+) | False | G74732 |
TU99945 | lncRNA | downstream | 19517 | 22129652 ~ 22129914 (+) | True | G74737 |
TU99948 | lncRNA | downstream | 43468 | 22153603 ~ 22154684 (+) | False | snx27b |
XM_039805304.1 | mRNA | upstream | 15980 | 22083669 ~ 22091963 (+) | True | slc50a1 |
XM_039806800.1 | mRNA | upstream | 27641 | 22069006 ~ 22080302 (+) | True | efna1b |
XM_039804783.1 | mRNA | upstream | 74676 | 21975192 ~ 22033267 (+) | True | efna3b |
XM_039804782.1 | mRNA | upstream | 74676 | 21975192 ~ 22033267 (+) | False | efna3b |
XM_039807229.1 | mRNA | upstream | 207291 | 21890529 ~ 21900652 (+) | True | flad1 |
XM_039805518.1 | mRNA | downstream | 381 | 22110516 ~ 22113062 (+) | True | krtcap2 |
XM_039805519.1 | mRNA | downstream | 390 | 22110525 ~ 22113062 (+) | False | krtcap2 |
XM_039805520.1 | mRNA | downstream | 3984 | 22114119 ~ 22115560 (+) | True | s100a10b |
XM_039804670.1 | mRNA | downstream | 11569 | 22121704 ~ 22124437 (+) | True | s100w |
XM_039804669.1 | mRNA | downstream | 13110 | 22123245 ~ 22124437 (+) | False | s100w |
TU99801 | other | upstream | 337657 | 21769548 ~ 21770286 (+) | True | G74633 |
TU99582 | other | upstream | 504713 | 21599055 ~ 21603230 (+) | True | them4 |
TU99513 | other | upstream | 703340 | 21403127 ~ 21404603 (+) | False | crot |
TU99269 | other | upstream | 1096572 | 21008033 ~ 21011371 (+) | False | sec61b |
TU98645 | other | upstream | 2458432 | 19646975 ~ 19649511 (+) | True | G73779 |
TU99947 | other | downstream | 22443 | 22132578 ~ 22136234 (+) | True | LOC120561539 |
TU99946 | other | downstream | 27430 | 22137565 ~ 22139223 (+) | False | LOC120561537 |
TU99979 | other | downstream | 87659 | 22197794 ~ 22199818 (+) | False | kcnn3 |
TU100002 | other | downstream | 175169 | 22285304 ~ 22288294 (+) | False | fam189b |
XR_005639675.1 | other | downstream | 186713 | 22296848 ~ 22306152 (+) | False | rusc1 |