Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039805553.1 |
| length | 2454 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 8 |
| gene id | rab13 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 22273092 ~ 22278899 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0035767 | endothelial cell chemotaxis | biological_process |
| GO:0032869 | cellular response to insulin stimulus | biological_process |
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0070830 | bicellular tight junction assembly | biological_process |
| GO:0001525 | angiogenesis | biological_process |
| GO:0044795 | trans-Golgi network to recycling endosome transport | biological_process |
| GO:0010737 | protein kinase A signaling | biological_process |
| GO:0015031 | protein transport | biological_process |
| GO:0006184 | obsolete GTP catabolic process | biological_process |
| GO:0032456 | endocytic recycling | biological_process |
| GO:1902463 | protein localization to cell leading edge | biological_process |
| GO:0030866 | cortical actin cytoskeleton organization | biological_process |
| GO:0031175 | neuron projection development | biological_process |
| GO:0032593 | insulin-responsive compartment | cellular_component |
| GO:0030139 | endocytic vesicle | cellular_component |
| GO:0043005 | neuron projection | cellular_component |
| GO:0005794 | Golgi apparatus | cellular_component |
| GO:0005802 | trans-Golgi network | cellular_component |
| GO:0055038 | recycling endosome membrane | cellular_component |
| GO:0005923 | bicellular tight junction | cellular_component |
| GO:0030027 | lamellipodium | cellular_component |
| GO:0016328 | lateral plasma membrane | cellular_component |
| GO:0030658 | transport vesicle membrane | cellular_component |
| GO:0003924 | GTPase activity | molecular_function |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K06109 | RAB13; Ras-related protein Rab-13 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU99992 | lncRNA | upstream | 17614 | 22255271 ~ 22255478 (+) | True | G74769 |
| TU99984 | lncRNA | upstream | 27329 | 22245489 ~ 22245763 (+) | True | G74765 |
| TU99983 | lncRNA | upstream | 30059 | 22242817 ~ 22243033 (+) | True | G74764 |
| TU99977 | lncRNA | upstream | 89055 | 22183783 ~ 22184037 (+) | True | G74760 |
| TU99948 | lncRNA | upstream | 118408 | 22153603 ~ 22154684 (+) | False | snx27b |
| TU100051 | lncRNA | downstream | 344316 | 22623215 ~ 22625953 (+) | True | arnt |
| TU100074 | lncRNA | downstream | 425973 | 22704872 ~ 22705303 (+) | False | LOC120562539 |
| TU100087 | lncRNA | downstream | 535145 | 22814044 ~ 22820053 (+) | False | myh14 |
| TU100374 | lncRNA | downstream | 639853 | 22918752 ~ 22920103 (+) | True | G75042 |
| TU100379 | lncRNA | downstream | 645693 | 22924592 ~ 22925155 (+) | True | G75045 |
| XM_039805206.1 | mRNA | upstream | 24565 | 22197712 ~ 22248527 (+) | True | kcnn3 |
| XM_039805203.1 | mRNA | upstream | 89664 | 22167465 ~ 22183428 (+) | False | adar |
| XM_039805204.1 | mRNA | upstream | 89664 | 22168954 ~ 22183428 (+) | True | adar |
| XM_039806904.1 | mRNA | upstream | 119159 | 22139780 ~ 22153933 (+) | True | snx27b |
| XM_039806903.1 | mRNA | upstream | 119159 | 22140128 ~ 22153933 (+) | False | snx27b |
| XM_039805554.1 | mRNA | downstream | 657 | 22279556 ~ 22286820 (+) | True | fam189b |
| XM_039805333.1 | mRNA | downstream | 10337 | 22289236 ~ 22295905 (+) | True | fdps |
| XM_039805334.1 | mRNA | downstream | 17949 | 22296848 ~ 22312520 (+) | True | rusc1 |
| XM_039805335.1 | mRNA | downstream | 17949 | 22296848 ~ 22312520 (+) | False | rusc1 |
| XM_039805336.1 | mRNA | downstream | 17949 | 22296848 ~ 22312520 (+) | False | rusc1 |
| TU99979 | other | upstream | 73274 | 22197794 ~ 22199818 (+) | False | kcnn3 |
| TU99946 | other | upstream | 133869 | 22137565 ~ 22139223 (+) | False | LOC120561537 |
| TU99947 | other | upstream | 136858 | 22132578 ~ 22136234 (+) | True | LOC120561539 |
| TU99801 | other | upstream | 502806 | 21769548 ~ 21770286 (+) | True | G74633 |
| TU99582 | other | upstream | 669862 | 21599055 ~ 21603230 (+) | True | them4 |
| TU100002 | other | downstream | 6405 | 22285304 ~ 22288294 (+) | False | fam189b |
| XR_005639675.1 | other | downstream | 17949 | 22296848 ~ 22306152 (+) | False | rusc1 |
| XR_005639857.1 | other | downstream | 191079 | 22469978 ~ 22489944 (+) | False | rprd2b |
| XR_005639856.1 | other | downstream | 191079 | 22469978 ~ 22488718 (+) | False | rprd2b |
| XR_005639804.1 | other | downstream | 281046 | 22559945 ~ 22585572 (+) | True | celf3b |
