Item | Value |
---|---|
RNA id | XM_039805800.1 |
length | 910 |
RNA type | mRNA |
GC content | 0.54 |
exon number | 6 |
gene id | LOC120562211 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_053118.1 |
NCBI id | CM020915.1 |
chromosome length | 43092710 |
location | 30951233 ~ 30965417 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
id | name | namespace |
---|---|---|
GO:0008152 | metabolic process | biological_process |
GO:0016881 | acid-amino acid ligase activity | molecular_function |
id | description |
---|---|
K20217 | UBE2E; ubiquitin-conjugating enzyme E2 E |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU103458 | lncRNA | upstream | 219633 | 30687338 ~ 30731600 (+) | False | rab5ab |
TU103334 | lncRNA | upstream | 548529 | 30398276 ~ 30402704 (+) | True | G77260 |
TU103340 | lncRNA | upstream | 590703 | 30360158 ~ 30360530 (+) | False | LOC120562443 |
XR_005639712.1 | lncRNA | upstream | 732630 | 30216748 ~ 30218603 (+) | True | LOC120562235 |
XR_005639690.1 | lncRNA | upstream | 830137 | 30119598 ~ 30121096 (+) | True | LOC120562092 |
TU103534 | lncRNA | downstream | 11324 | 30976741 ~ 30977081 (+) | True | G77399 |
XR_005639811.1 | lncRNA | downstream | 12910 | 30978327 ~ 30988733 (+) | True | LOC120562708 |
XR_005639812.1 | lncRNA | downstream | 49716 | 31015133 ~ 31016447 (+) | True | LOC120562710 |
TU103737 | lncRNA | downstream | 548719 | 31514136 ~ 31514561 (+) | True | G77555 |
TU103736 | lncRNA | downstream | 552346 | 31517763 ~ 31518618 (+) | True | G77554 |
XM_039805799.1 | mRNA | upstream | 2045 | 30909030 ~ 30949188 (+) | True | LOC120562210 |
XM_039806816.1 | mRNA | upstream | 219624 | 30723097 ~ 30731609 (+) | True | rab5ab |
XM_039806815.1 | mRNA | upstream | 219624 | 30723097 ~ 30731609 (+) | False | rab5ab |
XM_039806574.1 | mRNA | upstream | 237842 | 30705031 ~ 30713391 (+) | False | si:dkey-82o10.4 |
XM_039806573.1 | mRNA | upstream | 237842 | 30705032 ~ 30713391 (+) | True | si:dkey-82o10.4 |
XM_039806558.1 | mRNA | downstream | 3164 | 30968581 ~ 30976242 (+) | True | nr1d2a |
XM_039806559.1 | mRNA | downstream | 23346 | 30988763 ~ 31008397 (+) | False | LOC120562709 |
XM_039806561.1 | mRNA | downstream | 24045 | 30989462 ~ 30996435 (+) | True | LOC120562709 |
XM_039804660.1 | mRNA | downstream | 59567 | 31024984 ~ 31044407 (+) | False | LOC120561533 |
XM_039804659.1 | mRNA | downstream | 59567 | 31024984 ~ 31044406 (+) | True | LOC120561533 |
TU103301 | other | upstream | 826595 | 30123702 ~ 30124638 (+) | True | G77239 |
TU103032 | other | upstream | 1538820 | 29404008 ~ 29412413 (+) | False | G77028 |
TU103024 | other | upstream | 1561341 | 29384135 ~ 29389892 (+) | True | LOC120562177 |
TU103005 | other | upstream | 1620975 | 29328789 ~ 29330258 (+) | True | G77009 |
unassigned_transcript_354 | other | upstream | 2104450 | 28846712 ~ 28846783 (+) | True | trnaa-ugc_7 |
TU103600 | other | downstream | 169412 | 31134829 ~ 31136146 (+) | True | G77447 |
TU103881 | other | downstream | 1010901 | 31976318 ~ 31979909 (+) | True | G77682 |
XR_005639638.1 | other | downstream | 1439716 | 32405133 ~ 32421472 (+) | True | LOC120561717 |
XR_005639639.1 | other | downstream | 1439716 | 32405133 ~ 32421472 (+) | False | LOC120561717 |
TU104140 | other | downstream | 2134996 | 33100413 ~ 33101534 (+) | True | G77888 |