Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039806563.1 |
| length | 1236 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 2 |
| gene id | hoxa11b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 19859104 ~ 19861275 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU98714 | lncRNA | upstream | 38513 | 19820235 ~ 19820591 (+) | True | G73836 |
| TU98646 | lncRNA | upstream | 210197 | 19646975 ~ 19648907 (+) | False | G73779 |
| TU98640 | lncRNA | upstream | 219645 | 19634873 ~ 19639459 (+) | True | G73776 |
| TU98641 | lncRNA | upstream | 222222 | 19634873 ~ 19636882 (+) | False | G73776 |
| XR_005639810.1 | lncRNA | upstream | 233493 | 19614503 ~ 19625611 (+) | True | LOC120562701 |
| TU98764 | lncRNA | downstream | 157834 | 20019109 ~ 20052006 (+) | True | G73871 |
| TU98775 | lncRNA | downstream | 179596 | 20040871 ~ 20046380 (+) | True | G73881 |
| TU98936 | lncRNA | downstream | 346572 | 20207847 ~ 20209327 (+) | False | LOC120561838 |
| TU98940 | lncRNA | downstream | 354932 | 20216207 ~ 20217339 (+) | False | si:ch211-257p13.3 |
| TU99044 | lncRNA | downstream | 453209 | 20314484 ~ 20318117 (+) | True | G74067 |
| XM_039806557.1 | mRNA | upstream | 5516 | 19851243 ~ 19853588 (+) | True | hoxa13b |
| XM_039805067.1 | mRNA | upstream | 11702 | 19838549 ~ 19847402 (+) | True | hibadhb |
| XM_039805071.1 | mRNA | upstream | 11702 | 19838566 ~ 19847402 (+) | False | hibadhb |
| XM_039805069.1 | mRNA | upstream | 11702 | 19838714 ~ 19847402 (+) | False | hibadhb |
| XM_039805070.1 | mRNA | upstream | 11702 | 19838780 ~ 19847402 (+) | False | hibadhb |
| XM_039806522.1 | mRNA | downstream | 3880 | 19865155 ~ 19867601 (+) | True | hoxa10b |
| XM_039806535.1 | mRNA | downstream | 7905 | 19869180 ~ 19870738 (+) | True | hoxa9b |
| XM_039806514.1 | mRNA | downstream | 15602 | 19876877 ~ 19878668 (+) | True | hoxa2b |
| XM_039807244.1 | mRNA | downstream | 20602 | 19881877 ~ 19891979 (+) | True | skap2 |
| XM_039805300.1 | mRNA | downstream | 81712 | 19942987 ~ 19945175 (+) | True | LOC120561951 |
| TU98645 | other | upstream | 209593 | 19646975 ~ 19649511 (+) | True | G73779 |
| TU98340 | other | upstream | 700109 | 19148613 ~ 19158995 (+) | False | G73570 |
| TU98343 | other | upstream | 700109 | 19148613 ~ 19158995 (+) | True | G73570 |
| TU98057 | other | upstream | 1112429 | 18744662 ~ 18746675 (+) | True | LOC120562824 |
| TU98024 | other | upstream | 1205467 | 18652411 ~ 18653637 (+) | False | LOC120562819 |
| TU99269 | other | downstream | 1146758 | 21008033 ~ 21011371 (+) | False | sec61b |
| TU99513 | other | downstream | 1541852 | 21403127 ~ 21404603 (+) | False | crot |
| TU99582 | other | downstream | 1737780 | 21599055 ~ 21603230 (+) | True | them4 |
| TU99801 | other | downstream | 1908273 | 21769548 ~ 21770286 (+) | True | G74633 |
| TU99947 | other | downstream | 2271303 | 22132578 ~ 22136234 (+) | True | LOC120561539 |
