Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039807116.1 |
| length | 1233 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 8 |
| gene id | LOC120563082 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 26168464 ~ 26172414 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0004112 | cyclic-nucleotide phosphodiesterase activity | molecular_function |
| GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005639908.1 | lncRNA | upstream | 777 | 26155861 ~ 26167687 (+) | True | LOC120563083 |
| TU101930 | lncRNA | upstream | 15161 | 26151993 ~ 26153303 (+) | True | G76193 |
| TU101916 | lncRNA | upstream | 55959 | 26110603 ~ 26112505 (+) | True | G76180 |
| TU101904 | lncRNA | upstream | 104408 | 26063033 ~ 26064056 (+) | True | G76168 |
| TU101890 | lncRNA | upstream | 139717 | 26028498 ~ 26028747 (+) | True | G76156 |
| TU102007 | lncRNA | downstream | 42667 | 26215081 ~ 26215365 (+) | True | G76246 |
| TU102012 | lncRNA | downstream | 113886 | 26286300 ~ 26286500 (+) | True | G76251 |
| XR_005639860.1 | lncRNA | downstream | 404298 | 26576712 ~ 26600111 (+) | True | LOC120562862 |
| XR_005639858.1 | lncRNA | downstream | 404298 | 26576712 ~ 26591023 (+) | False | LOC120562862 |
| XR_005639859.1 | lncRNA | downstream | 404298 | 26576712 ~ 26581378 (+) | False | LOC120562862 |
| XM_039805358.1 | mRNA | upstream | 63780 | 26088953 ~ 26104684 (+) | True | LOC120561982 |
| XM_039807266.1 | mRNA | upstream | 100110 | 26065023 ~ 26068354 (+) | True | smpdl3b |
| XM_039807267.1 | mRNA | upstream | 100110 | 26065042 ~ 26068354 (+) | False | smpdl3b |
| XM_039807263.1 | mRNA | upstream | 110033 | 26050653 ~ 26058431 (+) | True | themis2 |
| XM_039807262.1 | mRNA | upstream | 110033 | 26052610 ~ 26058431 (+) | False | themis2 |
| XM_039806565.1 | mRNA | downstream | 144453 | 26316867 ~ 26427652 (+) | True | LOC120562714 |
| XM_039806477.1 | mRNA | downstream | 439572 | 26611986 ~ 26613382 (+) | True | LOC120562650 |
| XM_039806906.1 | mRNA | downstream | 449933 | 26622347 ~ 26634300 (+) | False | csf3r |
| XM_039806905.1 | mRNA | downstream | 449934 | 26622348 ~ 26634300 (+) | True | csf3r |
| XM_039807000.1 | mRNA | downstream | 463263 | 26635677 ~ 26644227 (+) | True | mrps15 |
| TU101929 | other | upstream | 25837 | 26139901 ~ 26142627 (+) | True | G76192 |
| TU101746 | other | upstream | 664412 | 25502600 ~ 25504052 (+) | True | apoc2 |
| TU101741 | other | upstream | 675307 | 25491814 ~ 25493157 (+) | False | apoc1 |
| TU101448 | other | upstream | 1179345 | 24915254 ~ 24989119 (+) | False | LOC120561858 |
| TU101208 | other | upstream | 1731645 | 24435139 ~ 24436819 (+) | True | G75644 |
| TU102095 | other | downstream | 635704 | 26808118 ~ 26815391 (+) | True | G76315 |
| TU102152 | other | downstream | 711036 | 26883450 ~ 26886546 (+) | True | G76355 |
| TU102237 | other | downstream | 1112124 | 27284538 ~ 27288457 (+) | True | G76417 |
| TU102349 | other | downstream | 1776469 | 27948883 ~ 27952580 (+) | True | G76511 |
| TU102453 | other | downstream | 2069369 | 28241783 ~ 28245161 (+) | True | G76581 |
