RNA id: XM_039807239.1


Basic Information

Item Value
RNA id XM_039807239.1
length 3223
RNA type mRNA
GC content 0.47
exon number 29
gene id tmem67
representative False

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 21172523 ~ 21183348 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATgattaggattgtgggtaaaaGGAAGACCGTTGTTTACCATGGCGACGGGGACGCTACCGCCTGTTGTTAACAGATACAAAGTGCAtctaacattattattatttctgttaATATACATAGGTCCACTTAATTGCCAGCAGTTTGTCATCCCATTTAAGGCTCCTTCAGACTGTAGTGCGGAAGAATTTTTCGATATCTCGAGTCTCTCGTGTGTGAGTTGCGGTTCAAATCAGCGACGGAGCACAACAGGACTCAGCTGCATTTGCAAAACTGGATACCAAACTCTCACCACTGACAAGGCCTCCATTACTTGTCAGCAATGTCCCACTGACAGCCCTGCAGTAACTACAGGTGGGTTTGGATGTATTCGCTGTCCAGGCAGTCTCAGTGATGAGGGGAAGTGCCAGTGCCCGCCAGGCAATGTTCTGGtggagaGAGATGTCAATGGAAACCTTTTGGAGGAGGCCAGCTGTGTAACATGTAATGGAAACTCCCCTGCTTTGTCTGTACCAAACCACAGTGGAGAAAGGTGTGAGAGATGTCAGGCTTCCTTCATTAATACCTCCTGTCTGTGTAACCCTCCTAATGTCCTGGCAGAAGGATTATGTTTCCCTCCAGGCAGCCTCTCCACTAATGTGAATCCCAGTGTCAACTATGCTGAGTTGAAGTTCAGTGTCCAGTCTGCGTGGTTCATCAAAAACCTGTACTCCTCCTCAGCAGCCTGCCTTGTCTTCTCTAACCTGACGGCGTGTCAGGCTCTTGGGAACATGTGTGTGATGAACATGCACTCCTTCAGCGGCATCTCCACCGATGCCTGCGGTCTCTTTAACACCATCTTCAGATCTAGGGCTGCTTTGAGCTCAACTCAAGACATTTCCTACTGGAGAGTTAATCTGCCATGGCTTTACTATGGGGACGAACCAGGACTGGCCAGTCGAGTGCTTCAGACCGATCCTGTTCCCATTAGGTTCAGTTTCAGAGGAAAAAACAAGAACACTGACATTAAGCTGCTTGCTGCTGTCTATAATGTTAGAGGGGAGTTCCTCAGATGGGAACAAGTAGGAGGACGTAACCTTCAGcTTTGTCCAGAAACGACCACCAAACAGGCAGCAGCCTTCAGCTTTGGAACTGCTTACCAAGAAAGTtgtgatcTTTCAGTAGCAGAGCTTTTGGGTACCCATCCAGAGCCGATCTTCTATGATGTGTTTATGGATCTTGGTGGAGGAGAGAACAGAAAACTTCTCCCTCTGCCTACACTAGTGTATAACCAGCAATACAATGGACGGTTCATCAACCAAGaGAGCATGAAGAACTGGTACCTGTCTCGGCGTATGTTTGTTGTCGACACACTGAGTGGAAGAGAGAAGAGCACGGATTCCCTGCCCAAAGTCATCCGTGTAGCCAGCAGTGTCAAAATAAGGTTCCAGCTGGTTCCACGAACCCAGGAAGGACAGGTGTTTACCCCTTTAATGACTGTGACCTACAAAGACATTCCCATCACGGATATCAATACACAAACTGTGACTACTACGTTTGCTGTAGAGTATGAGATGGATCAGAATGAGGCTCGCATAAAGACCGATaCTGCTCTAGGTGTGATGGGTGGCGTGGCCGTCCTCTACTCTCTGCTGAAGACGGTCAGCTGGAAGAGGAGGATTGCCTCTCCGCTCATTGACGTGGAGACTATGCTgaagtttttcctgttttatgcTGGAGATCTGGCCAATGTTTTCTTCGCCGTCACTGTGGGTACTGGACTTTACTGGCTCATCTTGTACAAGACATTAAAGGCCCAACAGTTTGTATCAGTACTGTTACCACTACCTGCTCAGGAGGGGCAGTTTGTGACGTACATTGGTTGTGCCTTTGCTCTCAAGGCCGTCCAGTTTCTCCACAAGCTGATTCTTCAGGTGTCAATTGATGTTTTCTTTATTGACTGGGAGAGGCCACGAAGCAAAGCTAACAGAACAGTGCAAGTTTCAGCTACTGGCGAGCCGAAACGTGACCCCTCTCCGGTTAGCATCTGGAGGACCTACTTTGTGGCTAATGAATGGAACGAGATCCAGACCATCCGCAAGATCAGCCCCACTTTTCAGATCATGGCTGTGCTCTTCTTTCTTGAAGTGCTGGGTTTCTCTAACCTGGCCCTCAGGGACCCCTGGCCAACTTTACAGCGCTCCTCACAGGCATACACCCCCTCATACAGCCTGATGCTGCGCTATGGTCTGGCAGCCACGCTGTGGCTCTGCATTGGACTTCTGCAGGTGATTTTCTTCACTGTGTTTCATGAGCACTTTGTGGAGGACAAAATCCGTCAGTTTGTAGATCTCTGCTCCATCAGTAATatttCTGTGCTGCTGTTATCTCACCGTTGTTTTGGCTACTACATTCACGGACGTTCAGTACATGGGCATGCAGACACAAACATGGAGGAAATGAACAACAATCTGAATAGAGAATCTGAGTCCCTGTGTGGTCAGAGAGGACTACTTCCCAACACAGAGATCCAGACCTTTCAGGTGTCTCTCACCAACCGCCTGCGGTCGCAGTATGACAGGATACAGGAGCAGATCAACAGGAGGCACGGGCCATCGCGACTGATGGACGAGTGCTCGGCTAACCAGTTTGAGCAGAGGGCCAGAGGCTACCAGACCATGAACCACTTTCTGGGATCCATTATAGACCATGCGTATCCTGAcatggactatatagtgaagGACAAGCTGATGTTTGAGAGGGTCATAGGGATGGAGTTTCTTGAACCCACTGAAAAAAGCATCTTTTACAATGACGAGGCCCATTCCTTTAGTGATGTGCTGTTTTATGGGAATGAGGCCACGCTGCTGATCTTTGATACTTTGTTCTTCTGTGTCGTCGACCTTGGGTCTCAGAGCTTTGTACTTGCAGCGGTGCTTACATGCGTACAGCAAATGATATTTCGCTTGATCCGTAACACTCTCGGAAGGAAGAACCTTGTCAGAAAGACTCTGGTGGATGAGAGATTTCTGATATAAAATTCCCTGCTAAGTAATTTGTAGTGTCGGTGTTGTTTGGTGGCATTCCTCTCAAAGATGTTTACTGTTCACAGCTTGTGCAgcttttttgtacttttctttacatatacagtattttcacTGCTGTTTCATGATGTACATATGATCATTTTTGATTTTGTAAGAGTttgatgtttttattgattaaaatgttttgataTGAAGACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU99289 lncRNA upstream 15612 21101170 ~ 21156912 (+) True G74234
TU99287 lncRNA upstream 20012 21150389 ~ 21152512 (+) True G74233
TU99243 lncRNA upstream 278582 20893139 ~ 20893942 (+) True G74207
TU99244 lncRNA upstream 279869 20891684 ~ 20892655 (+) True G74208
TU99241 lncRNA upstream 330755 20840560 ~ 20841769 (+) True G74205
TU99348 lncRNA downstream 59881 21243229 ~ 21243567 (+) True G74274
TU99365 lncRNA downstream 105823 21289171 ~ 21289375 (+) True G74286
TU99366 lncRNA downstream 106205 21289553 ~ 21290314 (+) True G74287
TU99367 lncRNA downstream 107694 21291042 ~ 21292380 (+) True G74288
TU99494 lncRNA downstream 151321 21334669 ~ 21335693 (+) False LOC120563169
XM_039806827.1 mRNA upstream 4838 21161670 ~ 21167686 (+) True si:ch211-197h24.6
XM_039806828.1 mRNA upstream 4838 21161676 ~ 21167686 (+) False si:ch211-197h24.6
XM_039806822.1 mRNA upstream 21011 21129350 ~ 21151513 (+) True invs
XM_039807088.1 mRNA downstream 603 21183951 ~ 21190820 (+) True pdp1
XM_039805736.1 mRNA downstream 51839 21235187 ~ 21240428 (+) False rnf41l
XM_039805739.1 mRNA downstream 51874 21235222 ~ 21240428 (+) False rnf41l
XM_039805738.1 mRNA downstream 52347 21235695 ~ 21240428 (+) True rnf41l
XM_039805737.1 mRNA downstream 52412 21235760 ~ 21240428 (+) False rnf41l
TU99269 other upstream 161153 21008033 ~ 21011371 (+) False sec61b
TU98645 other upstream 1523013 19646975 ~ 19649511 (+) True G73779
TU98340 other upstream 2013529 19148613 ~ 19158995 (+) False G73570
TU98343 other upstream 2013529 19148613 ~ 19158995 (+) True G73570
TU98057 other upstream 2425849 18744662 ~ 18746675 (+) True LOC120562824
TU99513 other downstream 219779 21403127 ~ 21404603 (+) False crot
TU99582 other downstream 415707 21599055 ~ 21603230 (+) True them4
TU99801 other downstream 586200 21769548 ~ 21770286 (+) True G74633
TU99947 other downstream 949230 22132578 ~ 22136234 (+) True LOC120561539
TU99946 other downstream 954217 22137565 ~ 22139223 (+) False LOC120561537

Expression Profile