Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039807338.1 |
| length | 1327 |
| RNA type | mRNA |
| GC content | 0.62 |
| exon number | 5 |
| gene id | LOC120563182 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053118.1 |
| NCBI id | CM020915.1 |
| chromosome length | 43092710 |
| location | 36368694 ~ 36383096 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0034220 | ion transmembrane transport | biological_process |
| GO:0030001 | metal ion transport | biological_process |
| GO:0010043 | response to zinc ion | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0046873 | metal ion transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| K14709 | SLC39A1_2_3, ZIP1_2_3; solute carrier family 39 (zinc transporter), member 1/2/3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU105357 | lncRNA | upstream | 29140 | 36335117 ~ 36339554 (+) | True | G78770 |
| TU105368 | lncRNA | upstream | 74307 | 36258160 ~ 36294387 (+) | False | G78772 |
| TU105373 | lncRNA | upstream | 79540 | 36288792 ~ 36289154 (+) | True | G78776 |
| XR_005639918.1 | lncRNA | upstream | 196530 | 36161780 ~ 36172164 (+) | True | LOC120563188 |
| TU105332 | lncRNA | upstream | 209392 | 36143677 ~ 36159302 (+) | False | G78759 |
| TU105400 | lncRNA | downstream | 14953 | 36398049 ~ 36415884 (+) | True | G78798 |
| TU105421 | lncRNA | downstream | 63551 | 36446647 ~ 36447215 (+) | False | G78813 |
| TU105422 | lncRNA | downstream | 63613 | 36446709 ~ 36507814 (+) | True | G78813 |
| TU105392 | lncRNA | downstream | 66687 | 36449783 ~ 36450210 (+) | False | LOC120563181 |
| TU105419 | lncRNA | downstream | 86160 | 36469256 ~ 36507814 (+) | False | G78813 |
| XM_039807339.1 | mRNA | upstream | 1669 | 36360700 ~ 36367025 (+) | True | nat16l |
| XM_039807329.1 | mRNA | upstream | 178279 | 36178207 ~ 36190415 (+) | True | LOC120563177 |
| XM_039807330.1 | mRNA | upstream | 178279 | 36178207 ~ 36190415 (+) | False | LOC120563177 |
| XM_039807324.1 | mRNA | upstream | 239452 | 36116750 ~ 36129242 (+) | True | LOC120563175 |
| XM_039807337.1 | mRNA | downstream | 9161 | 36392257 ~ 36450204 (+) | True | LOC120563181 |
| XM_039807340.1 | mRNA | downstream | 145385 | 36528481 ~ 36541530 (+) | True | LOC120563185 |
| XM_039806169.1 | mRNA | downstream | 245805 | 36628901 ~ 36670029 (+) | True | LOC120562456 |
| XM_039806171.1 | mRNA | downstream | 302840 | 36685936 ~ 36703993 (+) | False | LOC120562457 |
| XM_039806172.1 | mRNA | downstream | 377414 | 36760510 ~ 36792668 (+) | True | atp2c1 |
| TU105369 | other | upstream | 17699 | 36293987 ~ 36350995 (+) | True | G78772 |
| TU105334 | other | upstream | 227472 | 36137759 ~ 36141222 (+) | False | G78759 |
| TU105193 | other | upstream | 480522 | 35865842 ~ 35888172 (+) | False | LOC120562279 |
| TU105077 | other | upstream | 960012 | 35405375 ~ 35408682 (+) | True | G78594 |
| unassigned_transcript_361 | other | upstream | 1180495 | 35188118 ~ 35188199 (+) | True | trnas-aga_7 |
| TU105393 | other | downstream | 9156 | 36392252 ~ 36434225 (+) | False | LOC120563181 |
| TU105394 | other | downstream | 9156 | 36392252 ~ 36465230 (+) | False | LOC120563181 |
| TU105437 | other | downstream | 308297 | 36691393 ~ 36703865 (+) | True | LOC120562457 |
| TU105558 | other | downstream | 543616 | 36926712 ~ 36928871 (+) | False | G78888 |
| TU105685 | other | downstream | 1048075 | 37431171 ~ 37432679 (+) | True | G78989 |
