RNA id: unassigned_transcript_280


Basic Information

Item Value
RNA id unassigned_transcript_280
length 74
RNA type tRNA
GC content 0.50
exon number 1
gene id trnai-aau_7
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 19253 ~ 19326 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGCTGGTTAGCTCAGATGGTTAGAGTGTGGTGCTAATAATGCCAAGGTCATGGGTTTGATCCCCATACTGGCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93166 lncRNA upstream 39302 58628 ~ 60100 (-) True G69532
TU93168 lncRNA upstream 39376 58702 ~ 60100 (-) False G69532
TU93169 lncRNA upstream 39376 58702 ~ 60100 (-) False G69532
TU93176 lncRNA upstream 135748 155074 ~ 155292 (-) True G69539
TU93185 lncRNA upstream 198502 217828 ~ 233498 (-) True G69541
XM_039805286.1 mRNA upstream 137931 157257 ~ 178298 (-) True LOC120561943
XM_039805287.1 mRNA upstream 137931 157257 ~ 178297 (-) False LOC120561943
XM_039805638.1 mRNA upstream 276181 295507 ~ 321882 (-) True spag1b
XM_039805639.1 mRNA upstream 276181 295507 ~ 320816 (-) False spag1b
XM_039805631.1 mRNA upstream 325212 344538 ~ 724566 (-) False LOC120562122
unassigned_transcript_279 other downstream 966 18213 ~ 18287 (-) True trnai-aau_6
unassigned_transcript_278 other downstream 1326 17855 ~ 17927 (-) True trnar-ucg_2
unassigned_transcript_277 other downstream 2012 17167 ~ 17241 (-) True trnai-aau_5
unassigned_transcript_276 other downstream 2346 16835 ~ 16907 (-) True trnar-ucg_1
unassigned_transcript_275 other downstream 3033 16147 ~ 16220 (-) True trnai-aau_4
unassigned_transcript_281 other upstream 622 19948 ~ 20020 (-) True trnar-ucg_3
unassigned_transcript_282 other upstream 2010 21336 ~ 21409 (-) True trnai-aau_8
unassigned_transcript_283 other upstream 2698 22024 ~ 22096 (-) True trnar-ucg_4
unassigned_transcript_284 other upstream 3055 22381 ~ 22454 (-) True trnai-aau_9
unassigned_transcript_285 other upstream 4100 23426 ~ 23499 (-) True trnai-aau_10