RNA id: unassigned_transcript_284


Basic Information

Item Value
RNA id unassigned_transcript_284
length 74
RNA type tRNA
GC content 0.54
exon number 1
gene id trnai-aau_9
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 22381 ~ 22454 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGCCGGTTAGCTCAGATGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCATGGGTTTGATCCCCATACTGGCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93166 lncRNA upstream 36174 58628 ~ 60100 (-) True G69532
TU93168 lncRNA upstream 36248 58702 ~ 60100 (-) False G69532
TU93169 lncRNA upstream 36248 58702 ~ 60100 (-) False G69532
TU93176 lncRNA upstream 132620 155074 ~ 155292 (-) True G69539
TU93185 lncRNA upstream 195374 217828 ~ 233498 (-) True G69541
XM_039805286.1 mRNA upstream 134803 157257 ~ 178298 (-) True LOC120561943
XM_039805287.1 mRNA upstream 134803 157257 ~ 178297 (-) False LOC120561943
XM_039805638.1 mRNA upstream 273053 295507 ~ 321882 (-) True spag1b
XM_039805639.1 mRNA upstream 273053 295507 ~ 320816 (-) False spag1b
XM_039805631.1 mRNA upstream 322084 344538 ~ 724566 (-) False LOC120562122
unassigned_transcript_283 other downstream 285 22024 ~ 22096 (-) True trnar-ucg_4
unassigned_transcript_282 other downstream 972 21336 ~ 21409 (-) True trnai-aau_8
unassigned_transcript_281 other downstream 2361 19948 ~ 20020 (-) True trnar-ucg_3
unassigned_transcript_280 other downstream 3055 19253 ~ 19326 (-) True trnai-aau_7
unassigned_transcript_279 other downstream 4094 18213 ~ 18287 (-) True trnai-aau_6
unassigned_transcript_285 other upstream 972 23426 ~ 23499 (-) True trnai-aau_10
unassigned_transcript_286 other upstream 2014 24468 ~ 24541 (-) True trnai-aau_11
unassigned_transcript_287 other upstream 2702 25156 ~ 25228 (-) True trnar-ucg_5
unassigned_transcript_288 other upstream 3059 25513 ~ 25586 (-) True trnai-aau_12
unassigned_transcript_289 other upstream 3746 26200 ~ 26272 (-) True trnar-ucg_6