RNA id: unassigned_transcript_313


Basic Information

Item Value
RNA id unassigned_transcript_313
length 73
RNA type tRNA
GC content 0.52
exon number 2
gene id trnay-gua_7
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 8815953 ~ 8816041 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CcttcgatagctcagttggtagaggggaggactgtagATCCTTAGGTGGCTGGTTTAATTCCGGCTCGAAGGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU95576 lncRNA upstream 39445 8770205 ~ 8776508 (+) True LOC120561899
TU95570 lncRNA upstream 46889 8768688 ~ 8769064 (+) True G71475
TU95571 lncRNA upstream 49819 8765894 ~ 8766134 (+) True G71476
TU95558 lncRNA upstream 72163 8743528 ~ 8743790 (+) True G71463
XR_005639619.1 lncRNA upstream 168244 8646964 ~ 8647709 (+) True LOC120561615
TU95621 lncRNA downstream 307122 9123163 ~ 9125732 (+) True G71517
TU95622 lncRNA downstream 307201 9123242 ~ 9125732 (+) False G71517
TU95620 lncRNA downstream 307281 9123322 ~ 9125732 (+) False G71517
TU95667 lncRNA downstream 504411 9320452 ~ 9320696 (+) True G71553
TU95668 lncRNA downstream 507776 9323817 ~ 9324017 (+) True G71554
XM_039805233.1 mRNA upstream 41131 8760046 ~ 8774822 (+) False LOC120561899
XM_039805857.1 mRNA upstream 311501 8454764 ~ 8504452 (+) True LOC120562241
XM_039806352.1 mRNA upstream 431333 8364356 ~ 8384620 (+) True pomgnt2
XM_039806353.1 mRNA upstream 431333 8366524 ~ 8384620 (+) False pomgnt2
XM_039805236.1 mRNA upstream 507888 8283381 ~ 8308065 (+) False ano10a
XM_039806986.1 mRNA downstream 272143 9088184 ~ 9101502 (+) True LOC120562991
XM_039806987.1 mRNA downstream 272148 9088189 ~ 9101502 (+) False LOC120562991
XM_039804863.1 mRNA downstream 299670 9115711 ~ 9123087 (+) True popdc3
XM_039807105.1 mRNA downstream 311809 9127850 ~ 9144754 (+) False bves
XM_039807106.1 mRNA downstream 311809 9127850 ~ 9144293 (+) True bves
unassigned_transcript_312 other upstream 616 8815249 ~ 8815337 (+) True trnay-gua_6
unassigned_transcript_311 other upstream 2519 8813346 ~ 8813434 (+) True trnay-gua_5
unassigned_transcript_310 other upstream 3617 8812248 ~ 8812336 (+) True trnay-gua_4
unassigned_transcript_309 other upstream 4756 8811109 ~ 8811197 (+) True trnay-gua_3
unassigned_transcript_308 other upstream 5130 8810734 ~ 8810823 (+) True trnay-gua_2
unassigned_transcript_314 other downstream 238 8816279 ~ 8816367 (+) True trnay-gua_8
unassigned_transcript_315 other downstream 621 8816662 ~ 8816750 (+) True trnay-gua_9
unassigned_transcript_316 other downstream 1485 8817526 ~ 8817614 (+) True trnay-gua_10
unassigned_transcript_317 other downstream 1811 8817852 ~ 8817940 (+) True trnay-gua_11
unassigned_transcript_318 other downstream 2896 8818937 ~ 8819025 (+) True trnay-gua_12