RNA id: unassigned_transcript_351


Basic Information

Item Value
RNA id unassigned_transcript_351
length 73
RNA type tRNA
GC content 0.58
exon number 1
gene id trnar-acg_16
representative True

Chromosome Information

Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 17368703 ~ 17368775 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGGCCAGTGGCGCAATGGATAACGCGTCTGACTACGGATCAGAAGATTCTAGGTTCGACTCCTGGCTGGCTCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU97325 lncRNA upstream 302792 17065589 ~ 17065911 (+) True G72862
TU97344 lncRNA upstream 376714 16991716 ~ 16991989 (+) True G72879
TU97321 lncRNA upstream 405863 16959788 ~ 16962840 (+) True G72859
TU97304 lncRNA upstream 637659 16730837 ~ 16731044 (+) True G72852
TU97233 lncRNA upstream 874128 16494237 ~ 16494575 (+) True G72801
TU97549 lncRNA downstream 23493 17392268 ~ 17403627 (+) True G73019
TU97564 lncRNA downstream 59053 17427828 ~ 17463027 (+) True G73027
XR_005639682.1 lncRNA downstream 131814 17500589 ~ 17504921 (+) True LOC120562054
TU97801 lncRNA downstream 555175 17923950 ~ 17926628 (+) True G73186
TU97833 lncRNA downstream 745940 18114715 ~ 18116323 (+) True G73216
XM_039806677.1 mRNA upstream 206005 17149825 ~ 17162698 (+) False mrpl13
XM_039806676.1 mRNA upstream 206005 17151882 ~ 17162698 (+) True mrpl13
XM_039806667.1 mRNA upstream 239090 17109876 ~ 17129613 (+) True LOC120562784
XM_039806669.1 mRNA upstream 239619 17109876 ~ 17129084 (+) False LOC120562784
XM_039806666.1 mRNA upstream 239619 17110081 ~ 17129084 (+) False LOC120562784
XM_039805008.1 mRNA downstream 66399 17435174 ~ 17436804 (+) True LOC120561781
XM_039805007.1 mRNA downstream 70318 17439093 ~ 17445194 (+) True cdcp1a
XM_039805017.1 mRNA downstream 87868 17456643 ~ 17461118 (+) False ubxn11
XM_039805013.1 mRNA downstream 87870 17456645 ~ 17461118 (+) True ubxn11
XM_039805014.1 mRNA downstream 87870 17456645 ~ 17461118 (+) False ubxn11
TU97163 other upstream 1296502 16018359 ~ 16072201 (+) True G72750
TU97064 other upstream 1812751 15553464 ~ 15555952 (+) False irx4a
unassigned_transcript_349 other upstream 2342050 15026582 ~ 15026653 (+) True trnae-cuc_16
TU96917 other upstream 2738240 14626478 ~ 14630463 (+) False LOC120561718
TU96848 other upstream 2942523 14425794 ~ 14426180 (+) True G72506
TU97574 other downstream 80810 17449585 ~ 17452568 (+) True G73031
XR_005639656.1 other downstream 87868 17456643 ~ 17460327 (+) False ubxn11
TU97725 other downstream 276738 17645513 ~ 17647186 (+) True G73123
TU97779 other downstream 382181 17750956 ~ 17779130 (+) False paqr7b
XR_005639678.1 other downstream 1030281 18399056 ~ 18418232 (+) True kcnn4