RNA id: TU109681



Basic Information


Item Value
RNA id TU109681
length 763
RNA type TUCP
GC content 0.50
exon number 4
gene id G81445
representative False

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 1004039 ~ 1045512 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtgtgtgtgtgtgtgtgtgagagactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgagagactgtgtgtgtgtgtgtgtctgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctctctgtctgtgtatgtgtatgtgtatgtgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttctctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtctctgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgcgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU109687 lncRNA downstream 9081 1008882 ~ 1009249 (-) True G81448
TU109686 lncRNA downstream 10885 1007008 ~ 1007445 (-) True G81447
TU109659 lncRNA downstream 58735 938390 ~ 959595 (-) False G81435
TU109658 lncRNA downstream 58735 959193 ~ 959595 (-) True G81435
XR_005639986.1 lncRNA downstream 105557 902195 ~ 912773 (-) True LOC120563618
TU109698 lncRNA upstream 17606 1063118 ~ 1064072 (-) False G81456
TU109700 lncRNA upstream 17606 1063118 ~ 1064072 (-) True G81456
TU109701 lncRNA upstream 19018 1064530 ~ 1064837 (-) True G81457
TU109703 lncRNA upstream 19934 1065446 ~ 1066826 (-) True G81459
TU109704 lncRNA upstream 19934 1065446 ~ 1066913 (-) False G81459
XM_039809734.1 mRNA downstream 34168 967695 ~ 984162 (-) True LOC120564601
XM_039807903.1 mRNA downstream 82986 866706 ~ 935344 (-) True glsl
XM_039808070.1 mRNA downstream 218606 754068 ~ 799724 (-) True LOC120563709
XM_039808069.1 mRNA downstream 271277 720006 ~ 747053 (-) False LOC120563708
XM_039808066.1 mRNA downstream 498957 488832 ~ 519373 (-) True tbc1d15
XM_039807474.1 mRNA upstream 23277 1068789 ~ 1088673 (-) True LOC120563352
XM_039807797.1 mRNA upstream 106740 1152252 ~ 1177870 (-) True si:ch211-59o9.10
XM_039807811.1 mRNA upstream 135994 1181506 ~ 1194264 (-) True LOC120563572
XM_039808073.1 mRNA upstream 150411 1195923 ~ 1203372 (-) True sycp3
XM_039807821.1 mRNA upstream 159282 1204794 ~ 1235228 (-) True actr6
XR_005640151.1 other downstream 35967 982236 ~ 982363 (-) True LOC120564813
XR_005640150.1 other downstream 41322 976881 ~ 977008 (-) True LOC120564812
XR_005640148.1 other downstream 43797 974406 ~ 974533 (-) True LOC120564811
XR_005640147.1 other downstream 47719 970484 ~ 970611 (-) True LOC120564810
TU109164 other downstream 218792 798697 ~ 799538 (-) False LOC120563709
TU109718 other upstream 184328 1229840 ~ 1235216 (-) False actr6
TU109795 other upstream 425316 1470828 ~ 1472927 (-) True G81535
TU109840 other upstream 494452 1539964 ~ 1541474 (-) False kcnj11l
unassigned_transcript_365 other upstream 514506 1560018 ~ 1560089 (-) True trnae-uuc_57
unassigned_transcript_366 other upstream 515142 1560654 ~ 1560725 (-) True trnae-uuc_58

Expression Profile