RNA id: TU110061



Basic Information


Item Value
RNA id TU110061
length 1089
RNA type TUCP
GC content 0.54
exon number 7
gene id G81726
representative False

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 2670315 ~ 2678513 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GTCCAATCAGAAGCAGACTCAAAGATAGGGTGACAAACAGGACTTTTATTGTGGAATGTGAATCTagagacaggaagtgatgtttaggacaaattaaaatacaaacgATGATTGTTTTGCACACAACCCGCGACACAACAGGAAGTTTAATCCTCTTTAATCCGTCCAATCAGAACCAGACTCAAAGATTCAGggacaaacaaacaggacttcAGCAAACGCTCAGCGGAAGGTGCACGGTCCCCTTCGTCCTCCGGATAGAAGCAGCACGTCTACAGAGCTCGGCCAATCAGAGAGGAGCACAGGGACGgggggaaagagaggaggaggagcttcAGGCGAAGTTCTTCTTCAGGAAGTTGATGAGGCCGTTGGTGGACGAGTCGTGAGAGCTGACGGGCGCTCCGTCCTGCAGCTCTGGCTCGATCTGCTTCGCCAGCTGCTTCCCCAGttccacaCCCCACTGGTCGTAGCTGTTGATGTTCCACATGACGCCCTGCACAAAGATCTTGTGCTCGTACATCGCGACCAGAGCTCCCAGTATGAAGGGACTCAGCTTCTTGAAGACGATGGAGTTGCTCGGCTTGTTTCCTTCAAAAAactttgtGTGGCAGCAGCTTCTCCAGAGCGTCTCCCTTGAGGCCGACTGCCTCCAGCTCTCTCCGAGCCTCGTCTGAAGTCTTTCCTTTCATCAGAGCCTCGGTCTGGGCCAGGAAGTTAGCCACCAGGATCTTGTGGTGGAGGTTGTCTCTGATTGGATGCTGAGACTGAGCAGGAATGAGGAAGTCAGCGGGAATCATTCGAGTTCcttggtGGATCAGCTGGTAGAAGGCGTGCTGTCCGTTGGTCCCCGGTTCGCCCCACACGATTGGTCCGGTGTGGTGGTTGACTCGCACGCCGTCTTTGGTGATGTACTTCCCATTAGACTCCATGTCGCCctgctgGAAGTAGGCGGCGAAGCGGTGCATGTACTGGTCGTAGGGCAGCATGGCGTGCGTCTCGGCCTGGAAGAAGTTGATGTACCACACGCCCAGAACGGCGAGCAGCACGGGCACGTTCTGCTGCAGGGGGGCGCTACGGAAATGGTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU110063 lncRNA downstream 15627 2647294 ~ 2654688 (-) True G81728
TU110068 lncRNA downstream 16637 2653104 ~ 2653678 (-) True G81732
TU110052 lncRNA downstream 78639 2583702 ~ 2591676 (-) True G81721
TU110046 lncRNA downstream 94152 2575570 ~ 2576163 (-) True G81718
TU110044 lncRNA downstream 120435 2548959 ~ 2549880 (-) True G81717
TU110126 lncRNA upstream 28437 2706950 ~ 2769397 (-) True G81769
TU110130 lncRNA upstream 28437 2706950 ~ 2722015 (-) False G81769
TU110127 lncRNA upstream 72474 2750987 ~ 2769397 (-) False G81769
TU110128 lncRNA upstream 72474 2750987 ~ 2793405 (-) False G81769
TU110146 lncRNA upstream 73725 2752238 ~ 2754252 (-) False LOC120563733
XM_039807620.1 mRNA downstream 303025 2366330 ~ 2367290 (-) True LOC120563454
XM_039807617.1 mRNA downstream 312227 2357170 ~ 2358088 (-) True LOC120563451
XM_039807619.1 mRNA downstream 337836 2330224 ~ 2332479 (-) True LOC120563453
XM_039807622.1 mRNA downstream 356048 2289532 ~ 2314267 (-) False LOC120563455
XM_039808535.1 mRNA upstream 30003 2708516 ~ 2723969 (-) True mphosph6
XM_039808116.1 mRNA upstream 73793 2752306 ~ 2819413 (-) True LOC120563733
XM_039808921.1 mRNA upstream 379071 3057584 ~ 3067921 (-) True fem1b
XM_039809713.1 mRNA upstream 428577 3107090 ~ 3108199 (-) True LOC120564583
XM_039809710.1 mRNA upstream 433793 3112306 ~ 3130047 (-) False LOC120564581
unassigned_transcript_370 other downstream 139072 2531172 ~ 2531243 (-) True trnak-uuu_15
unassigned_transcript_369 other downstream 152882 2517362 ~ 2517433 (-) True trnae-uuc_60
unassigned_transcript_368 other downstream 225485 2444759 ~ 2444830 (-) True trnak-uuu_14
TU109967 other downstream 557466 2110621 ~ 2112849 (-) True G81655
TU109743 other downstream 942574 1725152 ~ 1727741 (-) False ambra1b
TU110074 other upstream 6385 2684898 ~ 2685240 (-) True G81738
TU110247 other upstream 259239 2937752 ~ 2937990 (-) True G81832
TU110610 other upstream 701514 3380027 ~ 3380528 (-) True G82122
TU110644 other upstream 815878 3494391 ~ 3578384 (-) True G82147
TU110810 other upstream 1598307 4276820 ~ 4278359 (-) True G82246

Expression Profile