RNA id: TU110771



Basic Information


Item Value
RNA id TU110771
length 283
lncRNA type intronic
GC content 0.35
exon number 2
gene id G82220
representative True

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 3997225 ~ 3999637 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


catacatacatacatacatacatacatacacacacacacacacacacacatacatacatacatacacacacacacacatacatacatacatacacacacatacatacatacatacatacatacacacacacacacacatacatacatacatacatacatacatacatacatacatacatacatacatacatacatacacacacacacacacacacatacatacatacatacacacacacacacacacacacacacacacatacatacatacatacacacacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU110757 lncRNA downstream 15831 3980005 ~ 3981549 (-) True G82210
TU110763 lncRNA downstream 23742 3973186 ~ 3973638 (-) True G82213
TU110761 lncRNA downstream 46448 3950671 ~ 3950932 (-) True G82211
TU110732 lncRNA downstream 83021 3913762 ~ 3914359 (-) True G82207
TU110723 lncRNA downstream 86763 3908590 ~ 3910617 (-) False G82200
TU110777 lncRNA upstream 33607 4033244 ~ 4042855 (-) True G82225
TU110781 lncRNA upstream 57337 4056974 ~ 4057299 (-) True G82229
TU110796 lncRNA upstream 76741 4076378 ~ 4167786 (-) False LOC120564247
TU110806 lncRNA upstream 98050 4097687 ~ 4129293 (-) False G82243
TU110807 lncRNA upstream 98050 4097687 ~ 4270916 (-) True G82243
XM_039808856.1 mRNA downstream 27594 3911044 ~ 3969786 (-) True LOC120564132
XM_039809804.1 mRNA downstream 171789 3799577 ~ 3825591 (-) True lrrn3a
XM_039807410.1 mRNA downstream 366565 3610411 ~ 3630815 (-) True znf277
XM_039808300.1 mRNA downstream 561075 3422286 ~ 3436305 (-) True ciao2a
XM_039809801.1 mRNA downstream 824223 3170771 ~ 3173157 (-) True rxfp3.3b
XM_039807492.1 mRNA upstream 19457 4019094 ~ 4060242 (-) True slc7a10b
XM_039809093.1 mRNA upstream 89047 4088684 ~ 4097476 (-) True LOC120564247
XM_039809099.1 mRNA upstream 125990 4125627 ~ 4127757 (-) True LOC120564250
XM_039809080.1 mRNA upstream 618689 4618326 ~ 4629983 (-) False prr33
XM_039809079.1 mRNA upstream 618689 4618326 ~ 4629983 (-) False prr33
TU110644 other downstream 418996 3494391 ~ 3578384 (-) True G82147
TU110610 other downstream 616852 3380027 ~ 3380528 (-) True G82122
TU110247 other downstream 1059390 2937752 ~ 2937990 (-) True G81832
TU110074 other downstream 1312140 2684898 ~ 2685240 (-) True G81738
TU110061 other downstream 1318867 2670315 ~ 2678513 (-) False G81726
TU110810 other upstream 277183 4276820 ~ 4278359 (-) True G82246
TU111250 other upstream 1004755 5004392 ~ 5011875 (-) True urahb
TU111339 other upstream 1481111 5480748 ~ 5483491 (-) False faap24
TU111877 other upstream 3288258 7287895 ~ 7291427 (-) True G83064
XR_005640162.1 other upstream 4575617 8575254 ~ 8575431 (-) True LOC120564825

Expression Profile