RNA id: TU114089



Basic Information


Item Value
RNA id TU114089
length 316
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G84719
representative True

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 14072633 ~ 14072948 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtttacatgttgtgatatgtatagtcacagggtgtacaaataacaaggtcactatgcttttactatctagtaattgttgactctattcctccaactctgagcgaactccaggcaaactctctgctcctcaccacagggcttcaggtgctgcgagcaaatcactccgcccaagtagcagaagtagcagtgcttcgcctttctgagaatatagttcccagtttgtgtatggttagaagatgtctgtgtctcatgtgaccttgttatttgtacacgctgtgtctatacaaatcataacatgTAAATAGAAACATGttgc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU113923 lncRNA downstream 387164 13683824 ~ 13685469 (-) True G84597
TU113916 lncRNA downstream 427785 13644417 ~ 13644848 (-) True G84592
TU113907 lncRNA downstream 628021 13434739 ~ 13444612 (-) True G84585
TU113867 lncRNA downstream 687428 13325986 ~ 13385205 (-) False LOC120564547
TU113825 lncRNA downstream 747375 13322182 ~ 13325258 (-) True G84536
XR_005640108.1 lncRNA upstream 150249 14223197 ~ 14232530 (-) False LOC120564470
TU114136 lncRNA upstream 150302 14223250 ~ 14236952 (-) True LOC120564470
TU114142 lncRNA upstream 150302 14223250 ~ 14236952 (-) False LOC120564470
TU114147 lncRNA upstream 164634 14237582 ~ 14238451 (-) True G84751
TU114148 lncRNA upstream 167573 14240521 ~ 14241054 (-) True G84752
XM_039808309.1 mRNA downstream 9890 14053952 ~ 14062743 (-) False neto2b
XM_039808308.1 mRNA downstream 9890 14053952 ~ 14062743 (-) True neto2b
XM_039808310.1 mRNA downstream 10140 14053952 ~ 14062493 (-) False neto2b
XM_039808313.1 mRNA downstream 26315 14039429 ~ 14046318 (-) True LOC120563866
XM_039807392.1 mRNA downstream 34917 14031108 ~ 14037716 (-) True zgc:77752
XM_039809703.1 mRNA upstream 6228 14079176 ~ 14090593 (-) False terb1
XM_039809704.1 mRNA upstream 7329 14080277 ~ 14090593 (-) True terb1
XM_039809705.1 mRNA upstream 7721 14080669 ~ 14090593 (-) False terb1
XM_039809479.1 mRNA upstream 37518 14110466 ~ 14198123 (-) False frmd4a
XM_039809470.1 mRNA upstream 37518 14110466 ~ 14184687 (-) False frmd4a
TU114030 other downstream 39418 14031104 ~ 14033215 (-) False zgc:77752
TU113910 other downstream 454737 13573831 ~ 13617896 (-) True mafb
TU113814 other downstream 841538 13230617 ~ 13231095 (-) True G84530
TU113260 other downstream 1928087 12141523 ~ 12144546 (-) True G84123
TU113209 other downstream 2184235 11888027 ~ 11888398 (-) True G84083
TU114145 other upstream 150302 14223250 ~ 14236952 (-) False LOC120564470
TU114408 other upstream 429012 14501960 ~ 14507201 (-) False LOC120563775
TU114449 other upstream 893507 14966455 ~ 14967447 (-) False si:ch1073-390k14.1
TU114482 other upstream 993091 15066039 ~ 15073350 (-) True G85014
TU114636 other upstream 1406034 15478982 ~ 15483926 (-) True ttc23

Expression Profile