RNA id: TU114148



Basic Information


Item Value
RNA id TU114148
length 308
lncRNA type inter_gene
GC content 0.50
exon number 3
gene id G84752
representative True

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 14240521 ~ 14241054 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGGGAGCTTACCTTTTTTGCTACGTTGCAGTATATCATTCGCCTCTTTTAGTGTGACTCCAGCGGGTGCAACAACTAAATCTTCCCTTTTGGTCATTGCCTCCTCCAGGGGTCTGTCATGGTCCTTCTCAGACAGAAAGTCAATGTCTCTGGAAGTGACAATGCCAACCAGCTTGCTGCCCATCTTGCCGGTCTCTGTAACAGGGATCCCAGAGAAACCATGGCGTGTCTTTGCCTCAAACACGTCCCCAACTGTGTGTCGGGGACTCATCACCACTGGGTCTGTAATAAAGCCCTGCTCAAATTTct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114147 lncRNA downstream 2070 14237582 ~ 14238451 (-) True G84751
TU114136 lncRNA downstream 3569 14223250 ~ 14236952 (-) True LOC120564470
TU114142 lncRNA downstream 3569 14223250 ~ 14236952 (-) False LOC120564470
XR_005640108.1 lncRNA downstream 7991 14223197 ~ 14232530 (-) False LOC120564470
TU114089 lncRNA downstream 167573 14072633 ~ 14072948 (-) True G84719
TU114158 lncRNA upstream 21649 14262703 ~ 14263115 (-) True G84760
TU114159 lncRNA upstream 22362 14263416 ~ 14263741 (-) True G84761
TU114161 lncRNA upstream 23671 14264725 ~ 14264986 (-) True G84762
XR_005640087.1 lncRNA upstream 42842 14283896 ~ 14284962 (-) True LOC120564348
TU114175 lncRNA upstream 124138 14365192 ~ 14365398 (-) True G84776
XM_039809479.1 mRNA downstream 42398 14110466 ~ 14198123 (-) False frmd4a
XM_039809470.1 mRNA downstream 55834 14110466 ~ 14184687 (-) False frmd4a
XM_039809484.1 mRNA downstream 55834 14110466 ~ 14184687 (-) False frmd4a
XM_039809471.1 mRNA downstream 56115 14110466 ~ 14184406 (-) False frmd4a
XM_039809469.1 mRNA downstream 56115 14110466 ~ 14184406 (-) False frmd4a
XM_039809826.1 mRNA upstream 4166 14245220 ~ 14251969 (-) False LOC120564658
XM_039809825.1 mRNA upstream 4166 14245220 ~ 14251968 (-) True LOC120564658
XM_039809531.1 mRNA upstream 32575 14273629 ~ 14274893 (-) True LOC120564497
XM_039809530.1 mRNA upstream 33251 14274305 ~ 14276077 (-) False LOC120564497
XM_039809493.1 mRNA upstream 222305 14463359 ~ 14480786 (-) False LOC120564472
TU114145 other downstream 3569 14223250 ~ 14236952 (-) False LOC120564470
TU114030 other downstream 207306 14031104 ~ 14033215 (-) False zgc:77752
TU113910 other downstream 622625 13573831 ~ 13617896 (-) True mafb
TU113814 other downstream 1009426 13230617 ~ 13231095 (-) True G84530
TU113260 other downstream 2095975 12141523 ~ 12144546 (-) True G84123
TU114408 other upstream 260906 14501960 ~ 14507201 (-) False LOC120563775
TU114449 other upstream 725401 14966455 ~ 14967447 (-) False si:ch1073-390k14.1
TU114482 other upstream 824985 15066039 ~ 15073350 (-) True G85014
TU114636 other upstream 1237928 15478982 ~ 15483926 (-) True ttc23
TU114652 other upstream 1273724 15514778 ~ 15544082 (-) True G85133

Expression Profile