RNA id: TU114158



Basic Information


Item Value
RNA id TU114158
length 413
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G84760
representative True

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 14262703 ~ 14263115 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTTTCTCTCTGACCACGAAGCATTGCTTTACAGGACCAATTTCAGAGAATATTTCCTCTAGGCGTTCATTTGTAGCTGAAGCTGGTAGAGAACCAACGAATATGGTCTGCGCTGGCATGGCTCTGCGCtgcctagctaacgttagccgttAGCCCGCTAATGTTCGGTAACAACTCACAAACTGATGTCTAAATTGTTAACAATCCCGTATTGGATGTCAATATCTAACTATTCGATATCAAACGAATCGGCGAAAATAATACATGCTCCAGAAATGTTAAACATAACGATAACTAGCTTCAAGATAAAATCGCATGTTTACATCATGGATGTATGtgggccgccatcttggaaactAAACGGAAACGGTCTCGAACTACACCTCGCATTTACTTGCAGAAAGCCGGTTCGTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114148 lncRNA downstream 21649 14240521 ~ 14241054 (-) True G84752
TU114147 lncRNA downstream 24252 14237582 ~ 14238451 (-) True G84751
TU114136 lncRNA downstream 25751 14223250 ~ 14236952 (-) True LOC120564470
TU114142 lncRNA downstream 25751 14223250 ~ 14236952 (-) False LOC120564470
XR_005640108.1 lncRNA downstream 30173 14223197 ~ 14232530 (-) False LOC120564470
TU114159 lncRNA upstream 301 14263416 ~ 14263741 (-) True G84761
TU114161 lncRNA upstream 1610 14264725 ~ 14264986 (-) True G84762
XR_005640087.1 lncRNA upstream 20781 14283896 ~ 14284962 (-) True LOC120564348
TU114175 lncRNA upstream 102077 14365192 ~ 14365398 (-) True G84776
TU114412 lncRNA upstream 295343 14558458 ~ 14567269 (-) True G84960
XM_039809826.1 mRNA downstream 10734 14245220 ~ 14251969 (-) False LOC120564658
XM_039809825.1 mRNA downstream 10735 14245220 ~ 14251968 (-) True LOC120564658
XM_039809479.1 mRNA downstream 64580 14110466 ~ 14198123 (-) False frmd4a
XM_039809470.1 mRNA downstream 78016 14110466 ~ 14184687 (-) False frmd4a
XM_039809484.1 mRNA downstream 78016 14110466 ~ 14184687 (-) False frmd4a
XM_039809531.1 mRNA upstream 10514 14273629 ~ 14274893 (-) True LOC120564497
XM_039809530.1 mRNA upstream 11190 14274305 ~ 14276077 (-) False LOC120564497
XM_039809493.1 mRNA upstream 200244 14463359 ~ 14480786 (-) False LOC120564472
XM_039809492.1 mRNA upstream 200244 14463359 ~ 14480786 (-) True LOC120564472
XM_039808182.1 mRNA upstream 238781 14501896 ~ 14558228 (-) True LOC120563775
TU114145 other downstream 25751 14223250 ~ 14236952 (-) False LOC120564470
TU114030 other downstream 229488 14031104 ~ 14033215 (-) False zgc:77752
TU113910 other downstream 644807 13573831 ~ 13617896 (-) True mafb
TU113814 other downstream 1031608 13230617 ~ 13231095 (-) True G84530
TU113260 other downstream 2118157 12141523 ~ 12144546 (-) True G84123
TU114408 other upstream 238845 14501960 ~ 14507201 (-) False LOC120563775
TU114449 other upstream 703340 14966455 ~ 14967447 (-) False si:ch1073-390k14.1
TU114482 other upstream 802924 15066039 ~ 15073350 (-) True G85014
TU114636 other upstream 1215867 15478982 ~ 15483926 (-) True ttc23
TU114652 other upstream 1251663 15514778 ~ 15544082 (-) True G85133

Expression Profile