RNA id: TU114161


Basic Information

Item Value
RNA id TU114161
length 241
lncRNA type inter_gene
GC content 0.49
exon number 2
gene id G84762
representative True

Chromosome Information

Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 14264725 ~ 14264986 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CTGATTCATCGTCTTTGTCGTCCTCATCTTCCTCgtcttcctcttcatcctgACTGTCATCTGGATCATCATTTGACTCAAGGCTACTTTtatcgtcgtcgtcgtcgtctcCCTCCTGGGACACATCATCATCCTctctctcatcatcatcatcatcatcatcatcatcctcctcctcctcctcctcctcctccctgtcttGTTCCCCACTATCATCTGATTGGGATTCTTCCACCTGTTG

Function

GO:

id name namespace
GO:0009186 deoxyribonucleoside diphosphate metabolic process biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU114159 lncRNA downstream 984 14263416 ~ 14263741 (-) True G84761
TU114158 lncRNA downstream 1610 14262703 ~ 14263115 (-) True G84760
TU114148 lncRNA downstream 23671 14240521 ~ 14241054 (-) True G84752
TU114147 lncRNA downstream 26274 14237582 ~ 14238451 (-) True G84751
TU114136 lncRNA downstream 27773 14223250 ~ 14236952 (-) True LOC120564470
XR_005640087.1 lncRNA upstream 18910 14283896 ~ 14284962 (-) True LOC120564348
TU114175 lncRNA upstream 100206 14365192 ~ 14365398 (-) True G84776
TU114412 lncRNA upstream 293472 14558458 ~ 14567269 (-) True G84960
XR_005640144.1 lncRNA upstream 542425 14807411 ~ 14808068 (-) True LOC120564774
TU114433 lncRNA upstream 586734 14851720 ~ 14852023 (-) True G84971
XM_039809826.1 mRNA downstream 12756 14245220 ~ 14251969 (-) False LOC120564658
XM_039809825.1 mRNA downstream 12757 14245220 ~ 14251968 (-) True LOC120564658
XM_039809480.1 mRNA downstream 114945 14110466 ~ 14149780 (-) False frmd4a
XM_039809531.1 mRNA upstream 8643 14273629 ~ 14274893 (-) True LOC120564497
XM_039809530.1 mRNA upstream 9319 14274305 ~ 14276077 (-) False LOC120564497
XM_039809493.1 mRNA upstream 198373 14463359 ~ 14480786 (-) False LOC120564472
XM_039809492.1 mRNA upstream 198373 14463359 ~ 14480786 (-) True LOC120564472
XM_039808182.1 mRNA upstream 236910 14501896 ~ 14558228 (-) True LOC120563775
TU114145 other downstream 27773 14223250 ~ 14236952 (-) False LOC120564470
TU114030 other downstream 231510 14031104 ~ 14033215 (-) False zgc:77752
TU113910 other downstream 646829 13573831 ~ 13617896 (-) True mafb
TU113814 other downstream 1033630 13230617 ~ 13231095 (-) True G84530
TU113260 other downstream 2120179 12141523 ~ 12144546 (-) True G84123
TU114408 other upstream 236974 14501960 ~ 14507201 (-) False LOC120563775
TU114449 other upstream 701469 14966455 ~ 14967447 (-) False si:ch1073-390k14.1
TU114482 other upstream 801053 15066039 ~ 15073350 (-) True G85014
TU114636 other upstream 1213996 15478982 ~ 15483926 (-) True ttc23
TU114652 other upstream 1249792 15514778 ~ 15544082 (-) True G85133

Expression Profile