RNA id: TU114175



Basic Information


Item Value
RNA id TU114175
length 207
lncRNA type inter_gene
GC content 0.53
exon number 1
gene id G84776
representative True

Chromosome Information


Item Value
chromosome id NC_053119.1
NCBI id CM020916.1
chromosome length 42187026
location 14365192 ~ 14365398 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ggtttaggagaaaaacaacggggaaaggacgcctcaaaagcagggaaacacaccgcgggtgaagcgcgacaataacggaatcgcggaggttgggtttaggacaaAAACAACGGGGacaggacgcctcaaaagcagGGAAACACGCcgtagacgggggaaacaaaagaaaaacaacggggaaaggacgcctcaaaagccgggaaacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005640087.1 lncRNA downstream 80230 14283896 ~ 14284962 (-) True LOC120564348
TU114161 lncRNA downstream 100206 14264725 ~ 14264986 (-) True G84762
TU114159 lncRNA downstream 101451 14263416 ~ 14263741 (-) True G84761
TU114158 lncRNA downstream 102077 14262703 ~ 14263115 (-) True G84760
TU114148 lncRNA downstream 124138 14240521 ~ 14241054 (-) True G84752
TU114412 lncRNA upstream 193060 14558458 ~ 14567269 (-) True G84960
XR_005640144.1 lncRNA upstream 442013 14807411 ~ 14808068 (-) True LOC120564774
TU114433 lncRNA upstream 486322 14851720 ~ 14852023 (-) True G84971
TU114375 lncRNA upstream 588730 14954128 ~ 14955407 (-) True G84948
TU114376 lncRNA upstream 588730 14954128 ~ 14955407 (-) False G84948
XM_039809530.1 mRNA downstream 89115 14274305 ~ 14276077 (-) False LOC120564497
XM_039809531.1 mRNA downstream 90299 14273629 ~ 14274893 (-) True LOC120564497
XM_039809826.1 mRNA downstream 113223 14245220 ~ 14251969 (-) False LOC120564658
XM_039809825.1 mRNA downstream 113224 14245220 ~ 14251968 (-) True LOC120564658
XM_039809483.1 mRNA downstream 240304 14110466 ~ 14124888 (-) False frmd4a
XM_039809493.1 mRNA upstream 97961 14463359 ~ 14480786 (-) False LOC120564472
XM_039809492.1 mRNA upstream 97961 14463359 ~ 14480786 (-) True LOC120564472
XM_039808182.1 mRNA upstream 136498 14501896 ~ 14558228 (-) True LOC120563775
XM_039807761.1 mRNA upstream 207333 14572731 ~ 14617358 (-) False LOC120563540
XM_039807760.1 mRNA upstream 207333 14572731 ~ 14617358 (-) False LOC120563540
TU114145 other downstream 128240 14223250 ~ 14236952 (-) False LOC120564470
TU114030 other downstream 331977 14031104 ~ 14033215 (-) False zgc:77752
TU113910 other downstream 747296 13573831 ~ 13617896 (-) True mafb
TU113814 other downstream 1134097 13230617 ~ 13231095 (-) True G84530
TU113260 other downstream 2220646 12141523 ~ 12144546 (-) True G84123
TU114408 other upstream 136562 14501960 ~ 14507201 (-) False LOC120563775
TU114449 other upstream 601057 14966455 ~ 14967447 (-) False si:ch1073-390k14.1
TU114482 other upstream 700641 15066039 ~ 15073350 (-) True G85014
TU114636 other upstream 1113584 15478982 ~ 15483926 (-) True ttc23
TU114652 other upstream 1149380 15514778 ~ 15544082 (-) True G85133

Expression Profile