Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU114804 |
| length | 792 |
| lncRNA type | sense_over |
| GC content | 0.46 |
| exon number | 5 |
| gene id | chd2 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053119.1 |
| NCBI id | CM020916.1 |
| chromosome length | 42187026 |
| location | 16155984 ~ 16187336 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005639953.1 | lncRNA | downstream | 128374 | 15858841 ~ 16048241 (-) | True | LOC120563424 |
| XR_005639952.1 | lncRNA | downstream | 128374 | 15969073 ~ 16048241 (-) | False | LOC120563424 |
| TU114653 | lncRNA | downstream | 632533 | 15536171 ~ 15544082 (-) | False | G85133 |
| TU114634 | lncRNA | downstream | 703758 | 15466582 ~ 15472857 (-) | True | G85125 |
| XR_005639984.1 | lncRNA | downstream | 720061 | 15455840 ~ 15456554 (-) | True | LOC120563610 |
| TU114811 | lncRNA | upstream | 5250 | 16188853 ~ 16194602 (-) | False | st8sia2 |
| TU114816 | lncRNA | upstream | 74372 | 16257975 ~ 16258235 (-) | True | G85250 |
| TU114820 | lncRNA | upstream | 92048 | 16275651 ~ 16277412 (-) | True | G85253 |
| TU114898 | lncRNA | upstream | 187398 | 16371001 ~ 16372919 (-) | True | G85312 |
| TU114905 | lncRNA | upstream | 277959 | 16461562 ~ 16462518 (-) | True | G85319 |
| XM_039808674.1 | mRNA | downstream | 1527 | 16155984 ~ 16175088 (-) | False | chd2 |
| XM_039808198.1 | mRNA | downstream | 364616 | 15802424 ~ 15811999 (-) | False | nr2f2 |
| XM_039808196.1 | mRNA | downstream | 366959 | 15802424 ~ 15809656 (-) | True | nr2f2 |
| XM_039808197.1 | mRNA | downstream | 366960 | 15802424 ~ 15809655 (-) | False | nr2f2 |
| XM_039808556.1 | mRNA | downstream | 692470 | 15472934 ~ 15484145 (-) | False | ttc23 |
| XM_039808675.1 | mRNA | upstream | 9980 | 16193583 ~ 16209186 (-) | True | st8sia2 |
| XM_039808991.1 | mRNA | upstream | 30172 | 16213775 ~ 16254088 (-) | True | slco3a1 |
| XM_039807711.1 | mRNA | upstream | 197340 | 16380943 ~ 16409443 (-) | True | LOC120563512 |
| XM_039807471.1 | mRNA | upstream | 268430 | 16452033 ~ 16461232 (-) | True | zgc:162879 |
| XM_039807741.1 | mRNA | upstream | 278952 | 16462555 ~ 16549024 (-) | False | sema4ba |
| TU114652 | other | downstream | 632533 | 15514778 ~ 15544082 (-) | True | G85133 |
| TU114636 | other | downstream | 692689 | 15478982 ~ 15483926 (-) | True | ttc23 |
| TU114482 | other | downstream | 1103265 | 15066039 ~ 15073350 (-) | True | G85014 |
| TU114449 | other | downstream | 1209168 | 14966455 ~ 14967447 (-) | False | si:ch1073-390k14.1 |
| TU114408 | other | downstream | 1669414 | 14501960 ~ 14507201 (-) | False | LOC120563775 |
| TU114908 | other | upstream | 255771 | 16439374 ~ 16440965 (-) | True | G85321 |
| unassigned_transcript_374 | other | upstream | 581112 | 16764715 ~ 16764786 (-) | True | trnah-gug_10 |
| TU115062 | other | upstream | 624453 | 16808056 ~ 16808416 (-) | True | G85435 |
| unassigned_transcript_375 | other | upstream | 1743444 | 17927047 ~ 17927118 (-) | True | trnaq-cug_6 |
| TU115583 | other | upstream | 1847405 | 18031008 ~ 18036276 (-) | True | G85813 |
