Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU118285 |
| length | 216 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 3 |
| gene id | LOC120564386 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053119.1 |
| NCBI id | CM020916.1 |
| chromosome length | 42187026 |
| location | 25074082 ~ 25075467 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005639970.1 | lncRNA | downstream | 10115 | 25062325 ~ 25063967 (-) | True | LOC120563511 |
| TU118261 | lncRNA | downstream | 168308 | 24905493 ~ 24905774 (-) | True | G87790 |
| XR_005639948.1 | lncRNA | downstream | 392346 | 24676596 ~ 24681736 (-) | True | LOC120563413 |
| TU118236 | lncRNA | downstream | 433357 | 24639857 ~ 24640725 (-) | True | G87767 |
| TU118234 | lncRNA | downstream | 434329 | 24639005 ~ 24639753 (-) | True | G87765 |
| XR_005640098.1 | lncRNA | upstream | 36610 | 25112068 ~ 25114245 (-) | False | LOC120564398 |
| XR_005640097.1 | lncRNA | upstream | 36610 | 25112068 ~ 25114245 (-) | True | LOC120564398 |
| TU118291 | lncRNA | upstream | 92618 | 25168076 ~ 25168327 (-) | True | G87815 |
| XR_005640067.1 | lncRNA | upstream | 105871 | 25181329 ~ 25228205 (-) | True | LOC120564148 |
| TU118363 | lncRNA | upstream | 141262 | 25216720 ~ 25217723 (-) | True | G87865 |
| XM_039809943.1 | mRNA | downstream | 179279 | 24765416 ~ 24894803 (-) | False | LOC120564736 |
| XM_039809945.1 | mRNA | downstream | 181483 | 24765416 ~ 24892599 (-) | False | LOC120564736 |
| XM_039809944.1 | mRNA | downstream | 255623 | 24765416 ~ 24818459 (-) | True | LOC120564736 |
| XM_039808218.1 | mRNA | downstream | 685833 | 24383761 ~ 24388249 (-) | True | LOC120563810 |
| XM_039807601.1 | mRNA | downstream | 880905 | 24161577 ~ 24193177 (-) | False | rag2 |
| XM_039808847.1 | mRNA | upstream | 186783 | 25262241 ~ 25278700 (-) | True | slc1a2b |
| XM_039808846.1 | mRNA | upstream | 186783 | 25262241 ~ 25278473 (-) | False | slc1a2b |
| XM_039808843.1 | mRNA | upstream | 193426 | 25268884 ~ 25278473 (-) | False | slc1a2b |
| XM_039808844.1 | mRNA | upstream | 193655 | 25269113 ~ 25293957 (-) | False | slc1a2b |
| XM_039808849.1 | mRNA | upstream | 227378 | 25302836 ~ 25387312 (-) | False | pamr1 |
| TU118279 | other | downstream | 8594 | 25064752 ~ 25065488 (-) | True | G87803 |
| XR_005640032.1 | other | downstream | 1157880 | 23909169 ~ 23916202 (-) | False | LOC120563922 |
| XR_005640031.1 | other | downstream | 1157880 | 23909169 ~ 23916202 (-) | False | LOC120563922 |
| unassigned_transcript_380 | other | downstream | 1158176 | 23915834 ~ 23915906 (-) | True | trnar-acg_18 |
| unassigned_transcript_379 | other | downstream | 1168909 | 23905102 ~ 23905173 (-) | True | trnam-cau_7 |
| TU118402 | other | upstream | 520895 | 25596353 ~ 25596761 (-) | True | G87897 |
| TU118702 | other | upstream | 1598385 | 26673843 ~ 26674883 (-) | False | ptprjb.1 |
| TU118864 | other | upstream | 1937779 | 27013237 ~ 27014411 (-) | True | G88249 |
| TU118971 | other | upstream | 2148594 | 27224052 ~ 27228966 (-) | False | zgc:153031 |
| TU119050 | other | upstream | 2279514 | 27354972 ~ 27355776 (-) | True | G88379 |
